Trichlorobacter lovleyi: Glov_0049
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Entry
Glov_0049 CDS
T00708
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
glo
Trichlorobacter lovleyi
Brite
KEGG Orthology (KO) [BR:
glo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glo03019
]
Glov_0049
Messenger RNA biogenesis [BR:
glo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Glov_0049
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
tRNA_anti_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
ACD93787
UniProt:
B3E9C1
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Position
complement(49624..50739)
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AA seq
371 aa
AA seq
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MPKQFIADLKDRDVVDSPFMVKEKTMAMAKNGKPYMNLKFMDKSGEIDGKLWDNVDELDK
TFQKGDFVRIRGTASLYMGKMQLVAKEIKRLEEEGVDLADFVPVSPVPQAEMRAELAQVV
ASLSNPYLKALMEGFCGDAEFMAGYCKAPAAKGMHHVYIGGLLEHSLSVVRLVDAIVPLY
PDLNRDLLVVGALLHDLGKVAELSYDRAFEYTDEGRLIGHISIGVEMLTERIATVPGFPR
ELAMLLKHLLLSHHGQYEYGSPKRPKTVEATILHYLDDMDSKINGIRSHIARETAQGNRW
TSHHRLYNLYFFTGNGMEDESEQEMIALSEPLAEAAPQAPAPAEKDKPKPARESFGNQPF
ANLKNLDLFGN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacagtttattgcagatctgaaagatagagatgtcgttgattccccgttcatg
gtcaaggaaaagaccatggccatggcaaagaacggcaagccgtacatgaacctgaagttc
atggacaagagcggcgagattgacggcaagctgtgggacaacgtggatgagctggacaag
acctttcagaagggtgattttgtcaggattcgcggcaccgcctcgctctacatgggcaag
atgcaactggtggccaaagagatcaaacggctggaagaagagggggttgatctggcggat
tttgtgccggtctcaccggtaccccaggccgagatgcgggccgagctggcacaggtggtg
gcatcgctgtccaacccctatctgaaggccttgatggaaggtttttgcggagatgcggag
ttcatggccggctactgcaaggccccggcagccaaggggatgcaccatgtctatatcggc
gggctgctggaacactccctgtcggtggtgcggctggtggatgccatagtaccgctctac
cctgatctgaaccgtgacctgctggtggtgggtgccctgctgcatgacctgggcaaggtg
gccgaactgtcctatgaccgcgcctttgaatataccgacgaagggcgcctgatcggacat
atcagcatcggtgtggagatgctgaccgagcggatcgccaccgtccccggcttcccccgt
gagctggccatgctgctgaagcatctgctgctgtcacaccacggccagtatgaatacggc
tcgcccaaacggcccaagacggtggaggccactatcctgcattacctggacgacatggat
tccaagatcaacggcatccgctcccacattgccagggaaacggcccagggcaaccgctgg
accagccaccatcggctctataacctctacttctttaccggcaacggcatggaagatgag
agtgagcaggagatgattgccctgtctgaaccgctggcagaggcggcaccgcaagcgcct
gcacctgctgaaaaggataaaccgaaaccggcccgggagagtttcggcaaccagcccttt
gcaaacctgaaaaatctggatctgttcgggaattag
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