Trichlorobacter lovleyi: Glov_0244
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Entry
Glov_0244 CDS
T00708
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
glo
Trichlorobacter lovleyi
Pathway
glo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
glo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Glov_0244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glo03400
]
Glov_0244
Enzymes [BR:
glo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Glov_0244
DNA repair and recombination proteins [BR:
glo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Glov_0244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
Helicase_RecD
UvrD-helicase
PIF1
AAA_28
NTPase_1
nSTAND3
AAA_22
PhoH
T2SSE
SLFN-g3_helicase
HHH
AAA
AAA_16
bpMoxR
ABC_tran
AAA_29
NPHP3_N
AAA_5
cobW
RsgA_GTPase
NACHT
HHH_2
MobB
Mg_chelatase
DEAD
Herpes_Helicase
TrwB_AAD_bind
AAA_7
AAA_14
AAA_24
TsaE
FtsK_SpoIIIE
GvpD_P-loop
Rad17
Motif
Other DBs
NCBI-ProteinID:
ACD93973
UniProt:
B3EAY9
LinkDB
All DBs
Position
222020..224206
Genome browser
AA seq
728 aa
AA seq
DB search
MNGKGTTSDVPVERISGSVERVTFHSEESGFCVLRIKVKGKRELVTVIGSAATITPGEFV
ECVGTWHNDKTHGLQFKTTHLKTVPPSTLEGIEKYLGSGMVKGIGPHFAKVLVKAFGVDV
FTVIEETPEKMLSLPGIGKKRTDKVTAAWAEQKAIREIMVFLQSHGVGTGRAVRIYKTYG
DEAIIKVSENPYRLALDIHGIGFKTADVIADRLGIAPDSLIRAQAGVRHVLQELSGDGHC
AATHDTLIKESVKLLEIDEAILEEAIREEVTQENLVPEEIDDVPCLFLSALHRAELGVAN
SVRRILSGEPPWGKIDMEKALPWVEEKTGLSLSQSQQDAVCLALTSKALVITGGPGTGKT
TLVNSILKILAAKQLEILLAAPTGRAAKRMTETTGREAKTIHRLLEFDPQSFGFKRGRDN
PLEADLIVIDESSMVDVVLMNKLLAAVPESTALMIVGDVNQLPSVGPGAVLADIITSGSV
PTVRLTEIFRQAATSKIIVNAHRINKGELPLRNETEELSDFYFIPAETPEEIHAKLLQVV
TERIPKRFGLHPVKDVQVLTPMNRGGLGAHALNAELQKVLNGNSEPKITRFGTTYSPGDK
IIQTVNNYDKEVFNGDIGQILEIDTEESSLKADYDGRIVEYEFGELDEVSLAYATSIHKS
QGSEYPAVVIPLAMQHYMLLERNLIYTAVTRGKKLVTIIGQPKALGMAVKNKNATKRLTN
LTARLRSA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggaaaggcaccacttcagatgtcccggtcgaacggatttccggttccgtcgag
agggtaaccttccacagcgaggaatcaggtttctgtgtgctccggatcaaggtaaaaggt
aagcgcgagttggtcacggtcatcggcagtgcggcaacgataaccccaggtgaattcgtc
gagtgtgttggtacctggcataacgacaagacccacggcctgcagttcaagactactcac
ctgaaaacagtccccccgagtaccctggaaggcatcgaaaagtaccttggctccggcatg
gtcaaagggatcggcccccatttcgccaaagtactggtgaaggcattcggcgtcgacgtc
ttcaccgttatcgaggaaaccccggagaaaatgctgtcactccccggcattggcaagaaa
aggacggataaagttaccgctgcctgggcagagcagaaagcgatccgggagatcatggtt
ttcctccagtcccatggtgtcgggaccggtcgggcggtcaggatctacaaaacttatggc
gatgaggccatcatcaaggtgtctgagaacccctaccgcttggctctcgacattcacgga
atcggtttcaagaccgctgacgtcattgccgacaggctgggtattgccccggactcactg
atccgggctcaggccggcgtgcgccatgtattgcaggagttgtccggcgacggccattgt
gccgccacccacgacaccctcatcaaggagtcggtaaagcttctggagattgacgaggca
atcctggaagaagcgatccgggaggaagtcacccaggaaaacctggtgccggaagaaatc
gacgacgttccctgtctgtttctgtccgcgcttcaccgggctgaactgggagtggcgaac
agcgtcaggagaatactgagtggagagccgccatggggcaaaatcgatatggaaaaggcg
ctcccctgggtggaagagaagacgggcctttcactctcccagtcgcagcaggacgctgta
tgccttgctttaaccagcaaagcactcgtcatcaccggcggcccgggcaccggcaagacg
accctggtcaatagcatcctgaagatcctcgcagccaaacagctcgaaatcctgttggcc
gccccgaccggacgcgcggccaagcggatgaccgagactacaggacgggaggccaagacc
attcatcgcctcctggagtttgatccccagagtttcggtttcaaacgcgggcgagacaac
cctctcgaagcagacctcatagtcattgacgaatcatctatggtggatgtggtgctgatg
aacaagctcctcgcggcagtccccgaaagcaccgctctgatgattgttggcgatgtaaat
cagctgccttcagtcggtcccggtgcggtgctggccgacatcatcacatccggttctgtc
ccgaccgtcaggctgaccgagattttccgccaggcagccacctcaaagatcatcgtcaat
gcccaccggatcaacaagggagagttgccgctgagaaatgaaacggaagagctatccgac
ttctacttcataccggcagaaactccggaagaaattcacgccaagctactgcaggtggtt
accgaacgcattccgaagcgcttcggcctgcatccggtcaaggatgtccaggttctcacc
ccgatgaaccggggaggactgggcgctcacgccttgaacgcggaactccagaaagtgctc
aatgggaacagcgagcccaaaataacccgctttggaacgacgtactcgccgggtgacaag
atcatccagacggtgaataactacgacaaggaagtcttcaacggggatattggccagatt
cttgaaatcgataccgaggaaagctccctcaaagctgattacgacggtagaatagtcgag
tatgaatttggtgaactggacgaggtgtcgctggcctatgccaccagcatccataagagc
cagggttcagagtacccagctgtcgtgattccactggcaatgcagcattacatgctgctg
gagaggaatctgatctatacggccgtcacgcgggggaaaaaactggtgacgatcatcggc
cagcccaaggcattgggtatggcggtgaagaataaaaatgccacaaagcgtttgacgaat
ttgacagcgaggctgcgttccgcatga
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