Trichlorobacter lovleyi: Glov_2723
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Entry
Glov_2723 CDS
T00708
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
glo
Trichlorobacter lovleyi
Pathway
glo03030
DNA replication
glo03430
Mismatch repair
glo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
glo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Glov_2723
03430 Mismatch repair
Glov_2723
03440 Homologous recombination
Glov_2723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
glo03032
]
Glov_2723
03400 DNA repair and recombination proteins [BR:
glo03400
]
Glov_2723
Enzymes [BR:
glo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Glov_2723
DNA replication proteins [BR:
glo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Glov_2723
DNA repair and recombination proteins [BR:
glo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Glov_2723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACD96436
UniProt:
B3E7B9
LinkDB
All DBs
Position
2922316..2925855
Genome browser
AA seq
1179 aa
AA seq
DB search
MEMPENSPVTPFVHLHLHSQYSLLDGAIRIEDLVSKAKQYQMPALAITDHGNMFGAVEFY
LKCKKAGIKPIIGCELYIAPDSRFSKDSKGISDAAYHLILLCQNLEGYKNLSYLTSAGYK
EGFYYRPRVDRALLEQHSEGLIALSACLKGEVAMQCGRGKMEDALETARWYSQLFPDRYY
IEIQENTLPEQDVVNQRLLEVARELNLPLVATNDCHYLNREDAKAHEVLLCIQTGKTMSD
PTHMRFSADEFYVKTPEEMAAAFHYAPEAIANTVAIAERCNLELPLEKEYYFPHFEPPEG
KTHDDMLEEQAVSGLEERLITIRAKYPDMTGEQVQAYHDRLRTELDCIRQMKFPAYFLIV
ADFINWAKRQGIPVGPGRGSAAGSLVAYAIKITDLDPLPYNLLFERFLNPERISMPDIDV
DFCQDQREKVIEYVVQKYGRERVCQIITFGTMKAKAVVRDVGRALDMAYGDVDKIAKLIP
DDLKMTIEKAIKQEPQLKEMAAADPKVAQLLETANCLEGLARHAGTHAAGVVVAPNQLEE
YLPVYKDQKTGGINTQYSMKYVEMVGLVKFDFLGLKNLTVIQNAVRMIREGQNPDFDITR
LRDDDQASYDLITAGNTTGIFQLESSGMKEMLVKLKPSCFEDVIAACALYRPGPLGCGMV
DEFIERKHGRQKVVYDLPQLEPILKDTYGVIVYQEQVMQISRSLAGYSLGRADLLRRAMG
KKDPAVMAKEKEPFLEGAKAQGLDIKKAEAIFDQMAKFAEYGFNKSHSAAYALIAYQTAY
LKAHYPVEFMAALLSCDMDSTDKVLKSISDCREQGIEVLPPDINTSGQSFTVSGKSMRFG
LGAVKGVGGGAVESIIEARADGPFTDIYDFCERVDLRRVNKRVMEALVKCGAFDSLHKHR
APLMAALDDATTAGQRFQEERDSAQVSLFGDMPTATATRSGRKLPDIEEWHDKEKLGYEK
EALGFLITGHPLDRYASDIKRLASAEIARLPEFPDNCEVRVCGIVTSLKEIITKKGDRMG
FVTIEDLTGQIEITVFSDMYVPAAALLKSDDPLLFTGKLEKGEKGCKLLVMKPQEGNGRK
FPNQVSVNGDIKLLSEAQEQQTTRVSLALRLLELTAEQLTPIRELLEKHPGNLPVLLKLE
IPNRSRTTIKLPDHLKVAASDEFRVAVERCVGYNAAIFE
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgcctgaaaatagtcctgttaccccctttgttcacctgcacctgcattcccaa
tactcgcttttggacggcgcgatcaggattgaagacctggttagcaaggccaaacagtac
cagatgcctgccctggccatcaccgaccacggcaacatgttcggtgcggtggaattttat
ctgaagtgcaagaaggccgggatcaaaccgatcatcggctgtgagctgtatatcgcccct
gattcccgcttttcaaaggattccaaggggatttccgatgccgcctatcacctgatcctg
ctctgccagaaccttgaaggctacaagaacctctcctacctgacctctgccggctacaag
gaagggttctactaccgcccccgggttgaccgcgccctgcttgaacagcacagtgaaggc
ctgatcgccctgtctgcctgcctgaagggcgaggttgccatgcagtgcggtcggggcaaa
atggaagatgcgctggagaccgcccgctggtacagccagctcttcccggaccgctattac
atcgagattcaggaaaacaccctgccggaacaggacgtggtcaaccagcgcctgctggag
gtggccagagagctgaacctgccgctggtggccaccaacgactgccactacctgaaccgc
gaagatgccaaggcccatgaggtgctgctctgcatccagaccggcaagaccatgtccgac
ccgacccatatgaggttctcggccgacgagttctacgtcaagaccccggaggagatggcg
gcggcctttcactatgccccggaggcgattgccaacaccgtggcgattgccgagcgctgc
aacctggaactgccgttggagaaggagtactacttcccgcactttgagccgccggaaggc
aagacccacgacgacatgctggaggagcaggccgtttccggccttgaagagcgcctgatc
accatccgcgccaaatacccggacatgaccggggaacaggtccaggcctaccatgaccgg
ctgcggaccgagctggactgtatccgccagatgaagttcccggcctacttcctgatcgtg
gctgacttcatcaactgggccaagcgacagggaattccggtgggaccgggacggggttcg
gctgccggttcgctggtggcctatgccatcaagattaccgaccttgacccgctgccctac
aacctgctgtttgagcgtttcctgaacccggaacggatctccatgcctgatatcgacgtg
gacttctgccaggaccagcgggaaaaggtgatcgagtacgtggtgcagaagtacggccgt
gagcgggtctgccagatcatcacctttgggaccatgaaggccaaggcggtggtgcgggat
gtggggcgcgccctggatatggcctatggcgatgtggacaagatcgccaagctgatccct
gacgacctgaagatgaccattgaaaaggcgatcaagcaggaaccgcagttaaaggagatg
gctgccgccgaccccaaggtggcccagctgctggagaccgccaactgcctggaagggctg
gcccgccacgccggtacccatgccgccggggtggtggtggcaccgaaccagctggaagag
tacctgccggtctacaaggatcagaagaccggcggcatcaacacccagtattccatgaag
tatgtcgagatggtggggctggtcaagttcgacttcctgggcttaaagaacctgaccgtg
atccagaacgcggtacggatgatccgggaaggccagaaccctgacttcgacatcacccgc
ctgcgggatgatgaccaggccagctacgacctgatcacggccggcaacaccaccggcatc
ttccagcttgaatccagcggcatgaaggagatgctggtcaagctgaagccctcctgtttt
gaagacgtgatcgcagcctgcgccctctaccgtcccggccccttaggctgcggcatggtg
gacgaatttatcgagcgcaagcacggccgccagaaggtggtctacgacctgccccagctg
gagccgatcctgaaggacacctacggggtcatcgtctatcaggagcaggtcatgcagatc
tctcgttccctggccgggtactctctgggacgggctgacctgctgcgccgcgccatgggt
aagaaagacccggcggttatggccaaggaaaaggaaccgttcctggaaggggccaaggcc
caggggctggacatcaagaaggccgaggcgatctttgaccagatggccaagtttgccgag
tacggcttcaacaaatcccattcggccgcctatgccctgatcgcctaccagaccgcctat
ctcaaggcccactacccggtcgagttcatggctgccctgctctcctgcgacatggatagc
accgacaaggtgctgaagagcatcagcgactgccgtgaacaggggatcgaggtgctgccg
ccggatatcaacacctcgggccagtcctttaccgtgtcgggcaagtcgatgcgcttcggt
ctgggtgcggtcaagggggttggcggcggagccgtggaatcgatcatcgaggcccgcgcc
gacggcccctttaccgatatctacgatttctgcgaacgggtggacctgcgccgggtcaac
aagcgggtcatggaggcgctggtcaagtgcggcgcctttgattccctccacaagcatcgc
gccccgctgatggcggccctggatgatgccaccacggcaggccagcgttttcaggaggaa
cgggacagcgcccaggtctccctgttcggcgatatgcccaccgccactgctacccgttcc
ggccgcaagctgccggatatcgaagaatggcatgacaaggaaaagctgggctatgaaaaa
gaggcgctgggcttcctgatcaccggccatccgctggaccgctatgcctccgacatcaaa
cggctggccagtgccgaaatcgcccggctgccggagttcccggacaactgcgaggtacgg
gtctgcgggatcgtgacctccctgaaggagatcatcaccaagaagggtgaccggatgggc
tttgtcaccatcgaagacctgaccggccagatcgagatcacggtcttttccgacatgtac
gtaccggctgccgccctcttgaaatccgatgacccgctgctgttcaccggcaagctggaa
aagggtgaaaagggctgcaagctgctggtgatgaagccccaggaaggcaatggccgcaag
ttccccaaccaggtcagcgtcaacggcgatatcaagctgctgtccgaggcccaggaacag
cagaccacccgcgtcagcctggcactgcgcctgctggaactgacagcggagcagctgaca
ccgatcagggaactgctggaaaagcaccccggcaacctgccggtgttgctgaagcttgaa
atccccaaccgcagccggaccaccatcaaactgccggatcacctgaaagtggcggccagc
gatgaatttagggtagcggtagaacgctgtgtcgggtataatgccgcgatctttgaatga
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