Trichlorobacter lovleyi: Glov_3519
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Entry
Glov_3519 CDS
T00708
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
glo
Trichlorobacter lovleyi
Pathway
glo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Glov_3519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glo03019
]
Glov_3519
Enzymes [BR:
glo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Glov_3519
Messenger RNA biogenesis [BR:
glo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Glov_3519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
MALT1_Ig
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACD97222
UniProt:
B3E2W2
LinkDB
All DBs
Position
3778904..3780214
Genome browser
AA seq
436 aa
AA seq
DB search
MKNIDVSFDSLGLRPELLSAITSLGYTSPTPIQAEAIPVIFEGCDLLAGAQTGTGKTAAF
ALPIVQMLAETTPAEKRRKPRALVLVPTRELAAQVSDEMNRYARRLSLRSTMIYGGVTIQ
AQIERLHRGVDIVVATPGRLLDHAERGTIDLSRIKFLVLDEADRMLDLGFIDEIKKVAEY
LPAKHQALLFSATYSQNIKQLADQLLDQPKRVEVARRTLTAEAVTQAVYQVERSRKREML
SFLIRKNGWNQVLVFTRTRYGADKLTEELLFDGIKAAAIHSNKSQSIRTRTLAEFKQGAF
RVLVATDVAARGLDIERLPHVVNYDLPQVPEDYVHRIGRTGRAGEEGIAISLVSQEEQIL
LAAIEKLVKQSIPRQSLAEFPQYAVRRTVKAKEGKLAKEQAKPKKTEVKAATPKRKKVVP
ERPAPKTGRRGQRSGR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacattgacgtatcttttgactcccttggcctgcgccccgaactgctgagcgcc
attaccagcctggggtatacctcccccaccccgattcaggccgaggcgattccggtgatt
tttgaggggtgcgacctgcttgccggagcccagaccggcaccggcaagaccgcggccttt
gccctgccgatcgtccagatgctggcagaaaccacccccgcagagaagcgcagaaagcca
cgtgccctggtgctggtgcccacccgtgagctggccgcccaggtcagcgacgagatgaac
cgctatgcccgccgtctgtcactgcgttcaaccatgatctatggtggcgtaaccatccag
gcccagattgaacggctgcaccgtggtgttgatattgtggtggcaacgccgggacggctg
ctggatcatgcagaacggggcacaattgacctgtcgcggatcaagtttctggtgctggat
gaggcagaccggatgctggatctgggctttatcgatgagatcaaaaaggtggcagagtac
ctgcctgcaaagcatcaggcattgctgttttcggccacctattcacaaaatatcaaacag
ttggctgatcagctgctggatcaacccaaacgggttgaggtggctcgccgtaccctgacc
gctgaggccgtgacccaggcggtgtatcaggtggagcgcagccgtaaacgggagatgctg
tcgtttctgatccgtaaaaacggctggaatcaggtgctggtctttacccgtacccgctac
ggcgcagacaaactgactgaagaactgctgtttgacgggatcaaggcggctgccatccac
agcaacaagagccagtcgatccgcacccgtaccctggcggaattcaaacagggcgctttc
cgggtgctggtggcaaccgacgtggctgcccgcggactggatattgaacggctgccccat
gtggtcaactatgacctgccccaggtgcctgaagattatgtgcaccggatcggccgcacc
ggccgtgccggagaagaggggatcgccatctcgctggtgagccaggaagaacagatcctg
ctggctgccatcgaaaagctggtcaagcagagcatcccgcgccaaagccttgcagaattt
cctcagtatgcggtcaggcggaccgtaaaggcaaaggaaggtaagctggctaaagagcag
gccaaaccaaagaagacagaagttaaagctgcaacccccaagcggaagaaggtggtgccg
gagcgtcctgcccccaagaccggccgccggggacagcggtcaggcagataa
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