Trichlorobacter lovleyi: Glov_3636
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Entry
Glov_3636 CDS
T00708
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
glo
Trichlorobacter lovleyi
Brite
KEGG Orthology (KO) [BR:
glo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
glo03016
]
Glov_3636
Enzymes [BR:
glo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Glov_3636
Transfer RNA biogenesis [BR:
glo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Glov_3636
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACD97336
UniProt:
B3E3R4
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All DBs
Position
complement(3908542..3909687)
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AA seq
381 aa
AA seq
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MPLLRYTVIEHNHQLEQLCAELTDETELALDLEADSMHHYREKVCLLQLSNRAGTWLVDP
LRLSDLSPLRVLLARPGLRTVLHGGDYDIRSLHRDFGIVVQQMFDTMVAAQFTGATEFGL
AALLREHFGIELDKRFQKADWSKRPLTTEMADYAAHDTAHLLELADRLHARLEQLGRREW
VAEECALLVGNRVAEKGNGPLFLNCKGAGKLKPRNLAILEALLQFRDQQAREADRPAFKV
IPAEALLKIAELVPAAVRDMNGIAGLTPRLLGRYGEQLLTVVRQGLAVAEADLPRFPRGR
GEPNPGIKARITRLKQWREGISSRMGLASGLLAPNWLLERIAEQQPVTLEQLQAIPGIRR
WQVGLWGTEMVETLAKETQTA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgccgctactgcgctatactgtgatagagcataaccatcagcttgagcagctctgtgct
gagctgactgatgagactgagctggcgcttgaccttgaagccgactcgatgcaccactac
cgggaaaaggtctgcctgttgcagctttcaaaccgtgccggaacctggttggttgatccg
ttacggctttcagatctttcgccactgagggtcttactggcacgaccgggactacgtacg
gtgctgcatggtggcgattatgatatccgctcgctgcatcgcgattttggtattgtcgtg
cagcagatgtttgacaccatggtcgcggcacagtttaccggtgctactgaatttggcctt
gctgcgctgctgcgggaacatttcgggatcgaactggacaagcgttttcagaaggcagac
tggagcaagcgcccgttaaccacagaaatggctgattatgcagcccatgatacggcccat
ttactggagctggcagatcgactgcatgcaaggctggagcagcttggccgcagggaatgg
gtagctgaagaatgcgccctgctggttggcaaccgggttgctgaaaagggcaacgggccg
ctctttctgaactgtaagggcgccggcaagttaaaaccccgtaacctggctatcctggag
gctctactgcagttccgggatcagcaggcgcgggaggccgaccggcccgccttcaaggtt
ataccggcagaggcattgcttaaaattgctgaactggtacctgctgcagttcgtgatatg
aacggaatagcgggactgacaccacgtctacttggccgttatggtgaacagctgctgaca
gtagtccggcaggggcttgccgttgctgaagcagatctgccccgctttccccggggcagg
ggagagcccaatccgggcatcaaggcgaggattacacggctcaagcaatggcgtgaaggg
atcagcagccgtatgggactggcttccggattgctggcgccgaactggttgctggagcgg
attgccgaacagcagccggtgacgctggagcagcttcaggccataccggggatccgccgc
tggcaggtcgggctgtggggtacagagatggttgagactctggcaaaggagacgcagaca
gcatga
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