Gloeocapsa sp. PCC 7428: Glo7428_0007
Help
Entry
Glo7428_0007 CDS
T02400
Name
(GenBank) putative exonuclease, RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
glp
Gloeocapsa sp. PCC 7428
Pathway
glp03410
Base excision repair
glp03430
Mismatch repair
glp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
glp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Glo7428_0007
03430 Mismatch repair
Glo7428_0007
03440 Homologous recombination
Glo7428_0007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glp03400
]
Glo7428_0007
DNA repair and recombination proteins [BR:
glp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Glo7428_0007
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Glo7428_0007
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Glo7428_0007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AFZ28625
LinkDB
All DBs
Position
complement(6451..8814)
Genome browser
AA seq
787 aa
AA seq
DB search
MPEQPQWLIPSFASPPEWFIQAVSNYCPNSSGKFAAQLLWQRGIQDQESLDTFVNPQAYK
AASPFEFGKEMHQAVTRLQQARDRREKVAIWGDFDADGITSTAVLWDGLGQFFNQNADLF
YYIPNRITESHGLNCQGIDILAQRGTQLIVTCDTGSTNITEIEYAQQLGIDVIVTDHHTL
PPERPSVVAIINPRYLPNDHQLFHLSGVAVAYKLVEALYQKIPNTSQQPLEDLLDLVAIG
LIADLVQLSGDCRYLAQLGIAKMQHDFKQPAAQRRRPGVGKLLELCQKSGDRPTDISFGL
GPRINAVSRIRGDASFCVELLTSHDIQRIEQLAQDTELANSRRKSLQKDVAQQVTAKLQQ
LDLSTTSVIVLEDPQWSAGVLGLVAGQVAQETGRPTILLSTEGITGVKNTSSPLARGSAR
SVNQIDLYQLVQDQAHLLHRFGGHPFAAGLSLAVENIPLFSEAINQRLRQSLSSSLTTPT
IQADLACTVQDLGKDLFWELKLLEPCGMGNPVPKLLIQNCWFENARHRNIRDAQGKEVKY
IKTEFILRDDSTPKGFPGIWWGHYREEIPPGRCDVIVELDYNSYSDPIKDKKPHYEVRLI
AVRATETTVNSTVQSHLSQILDWRNQDNITQLAAQQPILLLETCPNSWDDLRTWFKRSLG
EKKQLVLAWKKPQFLTPNQIWLSLLGIAKYISRTGQTVTRFQLCQKLAISDQTLKPGFQA
LSSIGFSISSVDRGFIITWQPQAIVSEAKCLQVIEKFLMAVQEEQFQQQYFSTVPLATIQ
AIVRGSS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacaaccgcagtggcttataccatcttttgcatcaccgcctgaatggtttatc
caggctgtcagtaattactgtcctaactcatcagggaaatttgctgcacagctactttgg
caacgcggaattcaagaccaagaaagcttagatacgtttgtcaatcctcaagcttacaaa
gctgcaagcccgtttgaatttggcaaagaaatgcatcaagcggtaacgcgattgcagcaa
gcacgcgatcgccgcgaaaaagtcgcgatttggggagactttgacgccgatgggattact
tcaaccgccgtactttgggatggtctaggacagttttttaaccaaaatgctgatttattt
tattacatacccaatcgcattacagagtcacacggtcttaactgccaaggaattgatatt
cttgcccaacgaggtacgcagttaatcgttacttgcgatacaggtagcacaaatattaca
gaaattgaatacgcccaacaacttggtatcgatgtcattgtcacggaccatcatacacta
ccgccagagcgcccgtcggttgtggcaattatcaatccccgctatttaccaaacgatcat
caattatttcatctttctggtgttgctgttgcgtataaactcgtagaagcattgtaccaa
aagatacccaatacttctcagcaaccattagaagatttacttgatttagtcgcaattggc
ttaatcgcagacttagttcaactttcaggagattgtcgctatttggcgcagttaggtatt
gctaagatgcaacacgactttaagcagccagcagcacagcggcgacgtccaggggttggc
aagttattagagttgtgtcagaaaagtggcgatcgcccgacagatatttcctttggttta
ggcccgcgcatcaatgcggtaagtcgaattcgcggtgacgcgagtttttgtgtcgaatta
ctcacaagccacgacatacaacgtattgagcagctagcacaagatacagaacttgcaaat
tctcgacgtaaatctttacaaaaagacgttgcgcaacaagttacagcaaaactacagcag
ctagatttatcgacgacgagtgtcatcgtattagaagatccacagtggtctgctggcgtg
cttggtttggtcgctggacaagtcgcgcaagaaacgggacgcccgacaattttattaagt
actgaaggaattactggcgtaaaaaacacttctagccccctagcgcgtggttcagcacgt
tcggtcaatcaaattgatttgtatcagttagtccaggatcaggcacatttattgcatcgt
tttgggggacatcctttcgccgctggattgagtttagctgtggaaaatattcctttgttt
tctgaggcgattaatcaaagattacgacaatctttaagtagtagcctgacaacaccaaca
attcaagcagacttggcgtgtactgtccaagacttaggcaaagatctcttttgggaatta
aaattactcgaaccgtgcggaatgggaaatcctgtacctaaactgttgattcaaaactgc
tggtttgaaaatgctcggcatcgtaatattcgagatgcacaaggcaaagaagtaaaatac
atcaaaacagagttcatcctgcgtgatgattcgactccaaaaggatttcctggaatttgg
tggggacattaccgcgaagaaattcctccagggcggtgcgatgtcatcgtagaacttgat
tacaattcttactcagatccaataaaagataaaaagccacattatgaggtacggttaatt
gcagttcgcgccactgaaactacggttaactctacggttcaaagtcatctaagtcagatt
ctagattggcgaaatcaagataatataacgcagctagctgctcaacaaccaattttgctg
ctggaaacttgcccaaatagttgggatgatttacgtacttggtttaagcgatcgcttggc
gaaaaaaaacagctagtgctagcctggaaaaagccacaatttcttacacccaatcaaatt
tggctttcgttactcggaattgcaaaatatatcagtcgcactggtcaaactgttacgcgg
tttcaactatgtcaaaaactagcgatcagcgatcaaacactcaaaccaggatttcaagct
ctcagtagtataggttttagtattagttctgttgaccgaggttttatcattacttggcaa
ccacaagccatagtatctgaagctaaatgtttgcaagttattgaaaaattcttaatggct
gtgcaagaagaacaatttcaacaacaatacttctcaactgttccgttagccactattcaa
gcaattgtacgcggctcaagctga
DBGET
integrated database retrieval system
