Gloeocapsa sp. PCC 7428: Glo7428_2202
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Entry
Glo7428_2202 CDS
T02400
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
glp
Gloeocapsa sp. PCC 7428
Pathway
glp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
glp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Glo7428_2202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glp03400
]
Glo7428_2202
DNA repair and recombination proteins [BR:
glp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Glo7428_2202
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Glo7428_2202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
AAA_23
nSTAND1
AAA_21
DnaJ_CXXCXGXG
nSTAND3
AAA_22
AAA_33
NACHT
AAA_25
AAA_18
Viral_helicase1
cobW
MMR_HSR1
MeaB
AAA_7
FtsK_SpoIIIE
Septin
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AFZ30723
UniProt:
K9XE09
LinkDB
All DBs
Position
complement(2482324..2485308)
Genome browser
AA seq
994 aa
AA seq
DB search
MVFPLLMSHPAETLDTLDANGNRPLGVNRASQNTIRIRGARQHNLKNIDLELPRDRLIVF
TGVSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQLDKPDVEAIEGLSPAISIDQKS
TSHNPRSTVGTVTEIYDYLRLLFGRAGKPHCPICDRSIAPQTIDEMSDRIMELPDRTRFQ
ILAPVVRGKKGTHRKLLSSLASEGFARVRIDGEVRELSDSIELDKNQTHNIEVVIDRLIK
KPGIQERLTDSLTTCLRRSEGIAVIEILDRAEADNNVVMHPTATQMKAAEDSTAYVTLPL
EKEIVFSENFACPEHGAVMEELSPRLFSFNSPYGACPHCHGLGNLRTFSPELVVPDPAQP
VYAAIAPWSEKDNSYYLSLLYSVGQAFGFEIKTLWKHLTPEQQHVILHGAEQPIWNHDRN
DYRRYAGVIPILQRQYNEASELIKQKLEQYLVYQPCEVCQGQRLKPEALAVRLGQYRILD
LTGVSIRDCQQRIHNLKLSDRQMQIADLVLREIKARLQFLLDVGLDYLTLDRPAMTLSGG
EAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNGRLLRTLTRLRDLGNTLIVVEHDEET
IRAADHVVDIGPGAGIHGGNIIAQGNLQALLEAKDSLTGAYLSGRQAIATPAQRREGNGR
SLVMKNAHRNNLRNIDVKIPLGKLVCVTGVSGSGKSTLINELLYPALQHHLTRKVPFPQQ
IDAVEGLDAVDKAIVIDQSPIGRTPRSNPATYTGVFDAIRDVFSQTIEAKARGYKPGQFS
FNVKGGRCEACGGQGVNVIEMNFLPDVYVQCEVCKGARYNRETLQVKYKGKSIADVLDMT
VEESLEVFQNIPKAFTRLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLATELSRRATGKT
LYLIDEPTTGLSFYDVHKLLDVLQRLVDKGNSILVIEHNLDVIRCSDWIIDLGPEGGDKG
GELVAAGTPESVAENSQSYTGQYIKQVLQQYPSK
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggtttttcctctgctcatgtctcaccctgctgaaactttagacacgctggatgcaaat
gggaatcgtccccttggtgtgaatcgcgctagtcagaatacaatccgtatccgtggggct
agacagcataacctcaagaatattgacttggaactaccgcgcgatcgcttgatcgtgttt
actggtgtatccggttcgggcaaatcttctttagcgtttgatacaatttttgccgaggga
cagcggcgctatgtagaatcactcagtgcttacgctaggcaatttttaggacaacttgat
aaacctgatgtcgaagcaattgaaggcttaagccctgcgatttcgatcgatcaaaaatca
acttcacacaatccccgttctacagttggtacagtaacagaaatttacgattacttgcga
ttattgttcggacgtgctgggaagccgcactgtccgatttgcgatcgctcgattgcaccg
cagacaatcgacgagatgagcgatcgcattatggaactacccgatcgcacgcgctttcag
attctcgcccccgtggtacgcgggaaaaaaggaacgcatcgcaaacttttatctagcctt
gcttccgaaggattcgcccgcgttagaattgatggagaagttcgcgaactaagtgactca
attgaacttgacaaaaatcaaacgcacaacatcgaagttgtcatcgatcgcttaattaaa
aaaccaggaattcaagaacgcctgacagattcgttaacgacttgcttgcggcgatccgaa
ggaattgctgtaatcgagattctcgatcgcgctgaggcagataataacgtcgtgatgcat
cctactgcaacacagatgaaagccgcagaggattcaactgcatacgtgactttaccttta
gaaaaagaaattgtcttttctgaaaactttgcgtgtcccgaacatggcgcggtgatggaa
gaactgtcaccacggttattttcgtttaattcgccgtatggtgcgtgtccgcactgtcat
ggattgggaaatttgcggacattttcaccggaattagttgttcccgatcctgcacagcct
gtttatgccgcgatcgcaccatggtcagaaaaagacaattcttattatctttccttactt
tatagtgttgggcaagcttttggatttgaaatcaaaacgctgtggaaacacttaacaccc
gaacagcaacacgttattttacacggtgcagaacaaccgatttggaaccacgatcgcaat
gattatcgccgttacgcaggtgtcattccaattttacagcgacaatataatgaggcttcc
gaactgatcaaacaaaaactcgaacagtatcttgtttatcaaccttgcgaagtttgtcaa
ggacaacgtttaaaacccgaagcgctggcggtgcgtttggggcaataccgcattctcgat
cttaccggagtttcgattcgcgattgtcaacagcggattcataatttaaaactcagcgat
cgccaaatgcaaattgctgatttggttctgcgcgaaattaaagcccgattgcagtttctt
ttggatgtagggttagattacctcactttagaccgtccagcgatgacactttcaggcgga
gaagcgcaacgcattcgcttagcaacgcaaatcggttcaggacttacgggcgtactttat
gttttagacgaaccgagtattggattgcatcaacgcgacaacggacgcttactacggact
ttaacgcgattacgcgatttgggaaataccttaattgttgtcgaacacgatgaagaaacc
atccgcgcggcggatcatgttgtcgatattggtcctggcgcggggattcatggtggtaat
attattgcccaagggaacttgcaagcattactagaagccaaagattcgctaacaggcgcg
tacctatcgggaagacaggcgatcgcaacacccgcacaacgacgcgaaggtaacgggcga
tcgcttgtcatgaaaaacgcccaccgcaacaacttaagaaacattgatgtcaaaattccc
cttggtaaacttgtctgcgtaactggggtttcaggttcgggtaaatcgacactaattaac
gaattactttatccggctttacaacatcacttaacgcgcaaagtgccatttccacaacag
atcgatgcggtggaaggattggacgcagtggataaggcgatcgtcatcgatcaatctccg
attgggcgaacaccgcgttctaaccccgcgacttatacaggtgtttttgatgcaattcgc
gacgtttttagtcaaacaatcgaagccaaagcacgaggttataagccaggacaattttca
tttaatgtcaaaggtgggcgctgcgaagcttgtggcggacaaggtgtcaatgtcattgaa
atgaactttcttcctgatgtttatgtgcagtgtgaagtttgtaaaggtgcgcgatacaat
cgcgaaacattgcaagtcaaatataagggaaaatccatcgctgatgttcttgatatgacg
gtagaggaaagcttagaagttttccaaaatattcctaaagcttttacgcgattgcaaaca
ttagttgatgttggtttgggatacattaaactcggtcaacctgcaacaacactatcaggt
ggtgaagcacaacgggtaaaattagcaactgagttatcgcgccgcgccacaggaaaaact
ttgtatttaattgacgaaccaacaacaggtttatcgttttatgacgtgcataaattacta
gatgttttgcaacgtttagttgataaaggtaattctattttggtaattgaacataattta
gatgtgattcgatgtagcgattggattattgatttaggtccagaaggtggtgataaaggt
ggtgaattggttgcagcaggtacgccggaatcagtagcagaaaattcacagtcttatacg
gggcaatatattaagcaggttttgcagcagtatccatcaaagtga
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