Gloeocapsa sp. PCC 7428: Glo7428_2515
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Entry
Glo7428_2515 CDS
T02400
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
glp
Gloeocapsa sp. PCC 7428
Pathway
glp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
glp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Glo7428_2515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glp03021
]
Glo7428_2515
Transcription machinery [BR:
glp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Glo7428_2515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AFZ31022
LinkDB
All DBs
Position
2825121..2826293
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AA seq
390 aa
AA seq
DB search
MNPANNVLETIHQPELEETANQPEGDLDLILEDDEDLVILDTEDTDDFLETQPDEDDAKS
GKAAKSRRRAQTKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIAELLEMERVRERL
LEQLDREPQDSEWAEAVQLSLPTFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSF
QDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETIS
RIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGD
FIESDGETPEDQVSKSLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNV
TRERIRQIEAKALRKLRHPNRNSVLKEYIR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggctaacaacgtactcgaaaccattcatcagcctgaacttgaagaaactgct
aatcaacccgaaggcgatttagatctcatactcgaagatgacgaggatttagtaatcctt
gacacggaggacactgatgattttctagaaactcagcctgatgaggacgacgctaagtct
ggtaaagccgctaaatctcgtcggcgggcgcaaaccaagaagaagcactatacagaagat
tctattcgcctctatctacaagagattggacggattcggctactacgggcagatgaagaa
attgaactcgcgcggaaaatcgcagagttgttggaaatggaaagagtccgcgaacgactg
ttagaacagttggatcgcgaaccacaagatagcgaatgggcagaagctgtgcagttgtct
ttaccaactttccgctatcgcctccatgtaggacggcgggcaaaagacaaaatggtacag
tcaaacttgcgtttggtggtttccatcgctaagaaatacatgaatcgcggtctatctttc
caagacttgattcaggaaggaagcttagggctaattcgcgcagccgaaaagtttgaccac
gagaaaggttacaagttttcgacgtatgcgacatggtggattcgtcaagcaattacacgc
gcgatcgccgatcagtcgcggacaattcgcttacccgttcacctttacgaaacaatctcg
cgcattaagaaaactaccaagctactttcgcaagaaatgggtcgcaagcctactgaagaa
gaaattgctacccgcatggaaatgacgattgagaagctacgctttatcgctaaatcggct
cagttgccaatttccttagaaacgcccatcggtaaagaagaagattctcgattgggcgat
tttattgagtctgatggtgaaacacctgaagatcaagtttccaagagcctcctgcgcgaa
gatcttgaaaaagtcttagatagtcttagtcctcgcgaacgagatgttttaagactacgc
tatggattagatgatggacgaatgaaaacgctagaagaaattggacagattttcaatgtc
actcgcgaacgcatccgtcaaatcgaagcgaaagcactgcgtaagctacgtcatcctaac
cgtaatagcgtgctgaaggagtatatccgatag
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