Gloeocapsa sp. PCC 7428: Glo7428_3256
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Entry
Glo7428_3256 CDS
T02400
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
glp
Gloeocapsa sp. PCC 7428
Pathway
glp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Glo7428_3256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glp03019
]
Glo7428_3256
03400 DNA repair and recombination proteins [BR:
glp03400
]
Glo7428_3256
Enzymes [BR:
glp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Glo7428_3256
Messenger RNA biogenesis [BR:
glp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Glo7428_3256
DNA repair and recombination proteins [BR:
glp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Glo7428_3256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
T4SS-DNA_transf
Acetyltransf_1
Motif
Other DBs
NCBI-ProteinID:
AFZ31742
UniProt:
K9XJ77
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All DBs
Position
3608989..3610797
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AA seq
602 aa
AA seq
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MPQLSSLESALKHYFGYDSFRPGQRCIVEQALQNRDLLVVMPTGGGKSLCFQLPALLKKG
LTVVVSPLIALMQDQVEALQDNGIGATFINSSLSAYHVRTREQAILSGKVKLLYIAPERL
LSEKFLPFLDLVHHQMGISAFAIDEAHCVSEWGHDFRPEYRQLQQLRHRFSGVPTIALTA
TATERVRQDIIQQLGLVEPSVHIASFNRQNLFYEVQPKQKQSYQQLLQLIRQQSGAGIIY
CLSRRRVDEIAFKLKNDGIAALPYHAGLSDRDRTANQTSFIRDDVQVMVATIAFGMGINK
PDVRFVIHYDLPRNLESYYQESGRAGRDGEPARCTLFLNYGDIKTIEYLIAQKPDPQEQR
IAKQQLRQVIDYAEGTDCRRTIQLSYFGERFSGKCDNCDNCCHPKPMQDWTIEAMKFLSC
VARCKERFGMTYIIDVLRGAKNQKILQNGHQNLSTYGIGKDRSIDDWRMLGRSLLHQGLL
AQTTDGYSVLKLNALSWEVMRRQRSVLIAVSATPTRISDEDTPAAAEVELLFQRLRKLRK
QLADEQGVPPYVIFADSTLRLMATQQPKSLAAFSQLSGVGSHKLARYGAQFLAEIQAYCE
EA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaattatcatccctagaaagtgcattaaaacattattttggctatgacagcttt
cgcccaggacaacgatgtattgtagaacaagcgctgcaaaaccgagatttactcgttgtg
atgccgactggcggcggtaaatcgctgtgttttcaactaccagcactcttaaaaaaaggc
ttaacggtggttgtgtcgccactcattgcgttgatgcaagatcaagtagaagcactgcaa
gataatggtatcggcgcaacatttattaatagtagtctcagtgcgtatcatgtgcggaca
cgcgaacaagcgattcttagtggtaaagtcaaacttctctacatcgcacccgaacgctta
ttaagtgaaaaatttctaccattcctcgatttggtacatcaccaaatggggatctctgcg
tttgcaattgatgaagcgcattgcgtttctgagtggggacacgactttcgccctgaatat
cgacaactccaacaactgcgtcaccgcttttctggtgtacctaccatcgcactgacagca
accgcgactgaacgcgtgcgccaagatattattcaacagttgggtttagttgaaccaagc
gttcatattgccagtttcaaccgtcaaaatctgttctacgaagttcagccgaagcagaaa
caaagctatcagcaattgctacaacttattcgtcaacaatcgggtgcaggaattatttat
tgtttaagtcgtcgccgcgttgatgaaattgctttcaaactaaaaaatgatggtatcgcc
gcgttaccctatcatgcagggttgagcgatcgcgatcgcactgcgaatcaaacaagcttt
attcgcgatgacgtacaagttatggtagcaacaatcgcgtttggtatgggaatcaataaa
cctgatgtgcgatttgtcattcactacgacttaccgcgtaatttagaaagctactatcaa
gaatcagggcgcgcagggcgtgatggcgaacccgcaaggtgtacgctgtttcttaactac
ggtgatattaaaacaatcgaatacctgattgcccaaaaacccgatccgcaagaacaacgc
attgccaaacaacaactgcgccaagtgattgactacgctgaaggaacagattgccgacgg
acaattcaattaagctattttggcgaacgattttcaggaaagtgtgataactgcgacaac
tgctgtcaccctaaaccgatgcaagattggacgattgaagcgatgaagtttctttcgtgt
gtggcgcggtgcaaagaaagatttggtatgacttacattattgatgtattacgcggcgca
aaaaatcagaaaattttgcaaaacggacaccaaaatctttcgacttatggcattggtaaa
gatcggagtattgatgactggcgaatgctggggcgatcgcttcttcatcaagggttactt
gcacaaaccaccgatggttactcggtactcaaactaaatgctttaagctgggaagtgatg
cggcgacagcgatcggtattgattgctgtaagtgcgacaccgactcggatttctgacgaa
gacactcccgctgctgctgaagttgagttgctatttcaacggttgcgtaagttgcgtaaa
caactcgctgacgaacaaggggttcccccgtatgtaatcttcgccgattctacacttcgg
ttgatggcaacacagcaacctaaaagcttagctgcgttttcccaactttctggtgtgggt
agtcacaaactcgcgcgttacggcgcgcaatttttagccgaaattcaagcttattgcgaa
gaggcgtga
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