Gloeocapsa sp. PCC 7428: Glo7428_3548
Help
Entry
Glo7428_3548 CDS
T02400
Name
(GenBank) DNA-directed RNA polymerase gamma chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
glp
Gloeocapsa sp. PCC 7428
Pathway
glp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
glp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Glo7428_3548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glp03021
]
Glo7428_3548
03400 DNA repair and recombination proteins [BR:
glp03400
]
Glo7428_3548
Enzymes [BR:
glp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Glo7428_3548
Transcription machinery [BR:
glp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Glo7428_3548
DNA repair and recombination proteins [BR:
glp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Glo7428_3548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
ANM3_zf-C2H2
Motif
Other DBs
NCBI-ProteinID:
AFZ32017
UniProt:
K9XK22
LinkDB
All DBs
Position
complement(3927507..3929381)
Genome browser
AA seq
624 aa
AA seq
DB search
MRHAQTTQFDYVKIGLASPERIRQWGERTLPNGQIVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKG
IPSYISILLDMPLRDVEQIVYFNAYVVLSPGNAETLTYKQLLTEDQWLEIEDQIYSEDSQ
LTGVEVGIGAEALARLLSDINLETEAEKLREEIANAKGQKRAKLIKRLRVIDNFIATGSQ
PDWMVMTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLHIHQCGLPREMAIELFQPFVIHRLIRSGLVNNIKAAKKLISRGDPSVWDVLE
EVIEGHPVLLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNILSPATGRPIITPSQDMVLGCYYLTAENPHSQKGAGRFFASLDD
AIMAYEQEQVALHAKVWVRFDGEVESTKPDTEPVKVEQNDDGTVTKHYRERRTREDANGN
LISQFIQTTPGRVIYNKVIQEALQ
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagacacgcgcaaacaacgcagtttgactatgtgaagattggtttagcttcacccgaa
cgcattcggcagtggggagaacgtaccctgcctaacggtcaaatcgtcggggaagttacc
aaaccagagacaattaactaccggacacttaaaccagagatggatgggctattttgcgag
cgcatctttggtccagcaaaagactgggaatgtcactgtggtaaatataaacgagtacgg
caccgtggtattgtctgcgaacgctgtggagtagaagttaccgaatcccgcgttcgccgc
catcgcatgggatacatcaaacttgctgcacctgttgcgcacgtttggtatctcaaaggg
ataccaagctatatctcaattttgctcgatatgcccctacgcgatgtcgaacaaattgtt
tacttcaacgcttacgttgttctgtctcctggtaatgctgagactttaacttacaaacaa
ctcttaaccgaagaccagtggctcgaaattgaagaccaaatctacagcgaagactcgcag
ctgactggcgtagaagtgggcattggtgcagaagcgctagcgcgtttactatcggatatc
aacttagaaactgaagccgaaaaactgcgcgaagaaatcgctaacgccaaaggacaaaaa
cgcgccaagctgattaagcgactgcgggtaatcgataactttatcgccactggctcgcaa
cctgattggatggtgatgactgttattcctgtcattcctcctgatttgcgcccgatggtg
cagcttgacggcggtcgtttcgcaacttctgacttgaatgacctttatcgtcgagtcatt
aaccgcaataaccgcttggcaagattgcaggaaattttagcgcctgaaattatcgttcgc
aacgaaaagcggatgctgcaagaagccgtcgatgcgctgattgataacgggcgtcgcggt
cgaactgtagtaggcgcaaataaccgaccgctgaagtctttgtcagacattattgagggt
aaacaaggtcgcttccggcagaacttactcggtaaaagggttgactactcagggcgatcc
gtcattgttgtgggaccaaaacttcatattcatcaatgcggtttacccagagaaatggcg
atcgagttgttccaaccttttgtcattcaccgattgattcggtcggggttagtcaacaac
attaaagcggctaaaaagctaatctcgcgaggcgatccgagtgtgtgggatgtcctcgaa
gaagtgattgaaggtcatcccgtcttactcaaccgcgcgccgacgctgcaccgcttagga
attcaagcctttgaaccgattcttgtcgaaggacgcgcgattcaactgcatccgcttgtc
tgccctgcgttcaacgctgactttgacggagaccaaatggcggttcacgtgccattgtct
ttagagtcacaagccgaggcacgattactgatgctggcgtctaataatattctgtcacca
gcaacaggtagaccaattattactcctagccaagatatggtcttggggtgctattaccta
acagcagaaaatccccacagccaaaaaggtgctggacgcttctttgcttcgcttgacgac
gcgattatggcttacgaacaagagcaagtcgcacttcatgccaaagtctgggtacggttt
gatggcgaagtcgaatcaacaaaaccagataccgaacccgttaaagtcgaacaaaatgat
gatggcacggtaacaaaacactatcgcgaacggcgtacccgtgaagatgctaatggaaat
ttgatttctcagtttatacaaacaactccaggtcgcgttatttacaacaaagtaattcag
gaagcgttgcagtaa
DBGET
integrated database retrieval system
