Gloeocapsa sp. PCC 7428: Glo7428_3628
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Entry
Glo7428_3628 CDS
T02400
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
glp
Gloeocapsa sp. PCC 7428
Pathway
glp03030
DNA replication
glp03430
Mismatch repair
glp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
glp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Glo7428_3628
03430 Mismatch repair
Glo7428_3628
03440 Homologous recombination
Glo7428_3628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
glp03032
]
Glo7428_3628
03400 DNA repair and recombination proteins [BR:
glp03400
]
Glo7428_3628
Enzymes [BR:
glp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Glo7428_3628
DNA replication proteins [BR:
glp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Glo7428_3628
DNA repair and recombination proteins [BR:
glp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Glo7428_3628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Nitr_red_bet_C
HHH_3
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AFZ32097
UniProt:
K9XKB4
LinkDB
All DBs
Position
complement(4036691..4040251)
Genome browser
AA seq
1186 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQIPALIERANELGMKAIALTDHGVMYGAIELIKICRNKNVK
PIIGNEMYVINGDIEEKKRRPRYHQVVLAKNTKGYKNLVKLTTISHLKGVQGKGIFSRPC
VNKELLKEYHEGLIVTSACLGGEVPQAILQGRLDIARKVAQEYKDIFGDDYYLEIQDHGS
QEDRIVNVEIVKIARELGIKFIATNDSHYISCFDVEAHDALLCIQTGKLIAEDNRMRYSG
TEYLKSAEEMSQLFRDHLSDDVIQEAIATTVEIADKVEPYHIMGEPRIPNYPVPAGHTAD
TFLEEVVWEGMLDRLRKRSRSEIEPIYKERLDYELKMIQQMGFSTYFLVVWDYIKYARDH
QIPVGPGRGSAAGSLVAYALRITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIERRDEV
IEYVTQKYGTERVAQIITFNRLTSKAVLKDVARVLDIPYGEADRMAKLIPVVRGKPTKLS
VMISDATPAPEFKEKYENDPKVRHWVDMAIRIEGTNKTFGVHAAGVVISSEPLDEIVPLQ
RNNDGSVITQYFMEDLESLGLLKMDFLGLKNLTLIQKTVELIKQNQNIEIDPDYLPLEER
KVQKILAKGEVKKMPQEVEKTYKVLEEGELEGIFQLESSGMRQIVRDLKPSCIEDISSIL
ALYRPGPLDAGLIPKFINRKHGREEIEYIHPLLEPILNETYAVLVYQEQIMKMAQDLAGY
SLGQADLLRRAMGKKKVSEMQKHREAFVDGAAKNGVRKQVAEDLFDQMVKFAEYCFNKSH
STAYGYVTYQTAYLKANYPVEYMAALLTANSGDTDKIQKYLSTCLNMNIQIEPPDINRSG
VDFTPVAGKILFGLSAVRNVGQNAIASILEARDKKGEFQSLADLCDRVDLRAVNRRTLEA
LIHCGAFDKLEANRKQLIEDLELVIDWAQSRAKDRASGQVNLFDWSGIANNDDRTNYELA
PKAPPVADYPPMEKLRWEKELLGFYVSDHPLKSLRSRTRLLSPINLSQLADQRDNTLLCA
VVMLTNIKPVVTKKGDRMAILQIEDLTGQTEAVVFPKAYERIGASLVADARMVVWGKVDR
RDDQIQLIVEDAEPIETVQLVMVELDPQQAATLDYQHRLKSILQEQLGEKDKAKIPVLAS
VKLGDRSQLVRFGRQFWVQNSQATVEMLKTASFSAYTQPIASQQHS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttggtttacatattcatagtgattacagcttactcgatggtgcaagtcaa
atacctgcacttattgaacgagccaatgagttaggaatgaaagcgatcgcacttaccgat
cacggtgtcatgtatggtgcgatcgaactgattaaaatttgccggaacaagaatgttaag
ccaattatcggcaacgaaatgtatgtcattaatggagatattgaggagaagaagcgtcgt
cctcgctatcaccaagttgttttagcaaaaaatacaaaaggttacaaaaatcttgttaaa
ttaacaacaatttcgcacttgaaaggtgttcagggaaaaggtattttttcgcgtccttgt
gtaaacaaagaactcttaaaagaataccatgaaggattaattgttacgagtgcttgttta
ggtggagaagttccgcaagcaattcttcaaggtcgattagatattgcgcggaaagtcgca
caagaatataaagatatattcggtgatgattattatttagaaattcaagatcacggttcg
caagaagaccgaattgttaatgttgaaattgttaaaattgcgcgagaattaggtattaaa
tttattgcgacaaacgattcgcactatatttcctgttttgatgtagaagcgcatgacgcc
ttgttgtgcattcaaacagggaaactgattgcagaagataaccgaatgcgctacagcggg
acagaatatctcaaatcagcagaggagatgagtcaactgtttcgcgatcatttatccgat
gatgtcattcaagaagcgatcgcaactacggtagaaattgccgacaaggttgaaccttat
catattatgggcgaaccgcgcattcctaactatccggttcccgcaggacataccgccgat
acttttctagaagaagttgtctgggagggaatgctagatcgtttaagaaagcgatcgcgt
agtgaaattgagccaatatataaagaaaggttggattatgaactcaaaatgatccaacaa
atgggtttttctacttattttttagttgtttgggactacattaaatacgccagagatcat
caaattccggttggtcctgggcggggttcggctgctggttctttagttgcttatgcttta
agaattacaaacattgaccccgtgcatcatggattgttatttgagcgatttttgaatcct
gaacgcaaatcaatgcctgatattgatacagatttctgtatcgaaagacgcgatgaagtt
atcgaatatgtaacacaaaaatacggaacagagcgagttgcccaaattattactttcaac
cgtctgacttccaaagccgttttaaaagacgtggcgcgggtattagatattccctatggt
gaagccgatcgcatggcgaagcttattcctgttgtacgcggtaaaccaactaaactttct
gtgatgatttctgatgcaactccagcaccagaattcaaagagaaatatgaaaacgatcct
aaagtccgccactgggttgatatggcgattcggattgaaggaactaataaaacctttggc
gttcacgctgcgggagttgtcatttcttctgaacctttagatgagattgtcccgttacaa
agaaacaacgatggttcagtgattacccagtatttcatggaggatttggaatcgctggga
ttactgaaaatggactttttgggattgaagaatttaacgcttattcaaaaaactgtcgaa
ttaattaaacaaaatcaaaatattgagattgaccccgactacctacccttggaagaaagg
aaagttcaaaaaatcttagccaagggcgaagtcaaaaaaatgccgcaagaagtagaaaaa
acttataaagttctcgaagaaggcgaactagaaggaatttttcagcttgaatcttcagga
atgcggcaaattgttcgcgatttgaagccttcttgtatcgaagatatttcttcaatcttg
gcattgtatcgccctggtccccttgatgctggactgattcccaaatttattaaccgcaag
cacggtcgcgaagaaatagaatacattcatccgctgttagagccaattttaaacgaaact
tatgcggttttggtgtatcaagaacaaatcatgaaaatggctcaagatttggcaggatat
tcgttaggacaagcagatttgttacgccgcgctatgggtaaaaagaaagtttctgagatg
caaaaacatcgggaagcttttgttgatggtgcagctaaaaatggtgtcagaaaacaagtt
gccgaagacttatttgaccaaatggttaagttcgctgaatactgttttaataagtcgcat
tcaacggcttatggttatgtcacctatcaaaccgcatatttaaaagcgaattatcctgta
gagtatatggcagcactactgacggcgaacagtggtgataccgataaaatccaaaaatat
ctttctacgtgtctgaatatgaatattcagatcgaaccgccagatattaatcgctctgga
gtcgattttacaccagtagccggcaaaattttatttggcttatcagccgtgcgaaatgtc
ggacaaaatgcgatcgcatccattttagaagcccgcgacaagaaaggcgaatttcaatcg
ctagctgatttgtgcgatcgcgtcgatttacgcgctgttaaccgtcgtactttagaagct
ttgattcattgtggtgcgtttgacaaactcgaagcgaatcgcaagcaactgattgaagat
cttgagttggtcattgactgggcgcaatcgcgggctaaagatcgtgctagtggtcaagtc
aatttattcgattggagtgggatagcgaataatgacgatcgcactaactatgaattagca
cccaaagccccgcctgtagcagactacccgcccatggaaaaactgcgatgggaaaaagaa
cttcttggtttttatgtctcggatcatccgttaaagtcgctgcgatcgcgtacgcgactg
ttgtcacccatcaatttatcgcaactcgccgatcaacgcgataatactttactctgtgcg
gtcgtgatgttgactaatatcaaaccagtggtcacgaaaaaaggcgatcgcatggcaatt
ttacaaattgaagatttaaccggacaaaccgaagccgttgtcttccccaaagcttatgaa
cgaatcggcgcatcacttgttgcagatgccagaatggttgtctggggtaaagtagaccgc
cgcgatgaccaaatccagctgattgtagaagatgctgaaccgattgagacagtgcagtta
gttatggtagaactcgatcctcagcaagctgcaacgcttgattatcaacaccgcttaaaa
agtatcttacaagaacagctaggtgaaaaagacaaagcaaaaattccggttctagcgtcg
gtgaaattgggcgatcgcagtcaattagtacgctttgggcgacagttttgggtacaaaat
agccaagcaactgtagaaatgctcaaaacagccagcttttctgcttatactcaaccaatt
gccagtcaacaacattcgtaa
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