Gloeomargarita lithophora: GlitD10_0141
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Entry
GlitD10_0141 CDS
T09871
Symbol
hupB-1
Name
(GenBank) nucleoid protein hbs
KO
K03530
DNA-binding protein HU-beta
Organism
glt
Gloeomargarita lithophora
Brite
KEGG Orthology (KO) [BR:
glt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
glt03032
]
GlitD10_0141 (hupB-1)
03036 Chromosome and associated proteins [BR:
glt03036
]
GlitD10_0141 (hupB-1)
03400 DNA repair and recombination proteins [BR:
glt03400
]
GlitD10_0141 (hupB-1)
DNA replication proteins [BR:
glt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GlitD10_0141 (hupB-1)
Chromosome and associated proteins [BR:
glt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GlitD10_0141 (hupB-1)
DNA repair and recombination proteins [BR:
glt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GlitD10_0141 (hupB-1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HU-HIG
DUF2267
Motif
Other DBs
NCBI-ProteinID:
APB32442
UniProt:
A0A1J0A930
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All DBs
Position
complement(150647..150928)
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AA seq
93 aa
AA seq
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MNKEELVTEVASKAGTTKKVAESVLDATLEAIIDSVAEGQKVTLVGFGSFEARKRQAREG
RNPGTGDPLHIPAKTVPTFSAGKLFREKVADGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggaagaattggtcactgaagtcgcctcgaaagcggggacaaccaaaaaggtg
gctgagtcggtgttggatgcgaccctagaagcgattatagactcggttgccgaaggccaa
aaagtgaccttggtggggtttggctcttttgaagcccgcaaacggcaagcacgggaaggt
cgcaatcccggtaccggtgacccgcttcacattcctgccaaaactgtgccgacgttttcc
gctgggaaattatttcgcgaaaaagtggctgatgggggttga
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