KEGG   Gloeomargarita lithophora: GlitD10_0141
Entry
GlitD10_0141      CDS       T09871                                 
Symbol
hupB-1
Name
(GenBank) nucleoid protein hbs
  KO
K03530  DNA-binding protein HU-beta
Organism
glt  Gloeomargarita lithophora
Brite
KEGG Orthology (KO) [BR:glt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:glt03032]
    GlitD10_0141 (hupB-1)
   03036 Chromosome and associated proteins [BR:glt03036]
    GlitD10_0141 (hupB-1)
   03400 DNA repair and recombination proteins [BR:glt03400]
    GlitD10_0141 (hupB-1)
DNA replication proteins [BR:glt03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    GlitD10_0141 (hupB-1)
Chromosome and associated proteins [BR:glt03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    GlitD10_0141 (hupB-1)
DNA repair and recombination proteins [BR:glt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      GlitD10_0141 (hupB-1)
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_euk_2 HU-HIG DUF2267
Other DBs
NCBI-ProteinID: APB32442
UniProt: A0A1J0A930
LinkDB
Position
complement(150647..150928)
AA seq 93 aa
MNKEELVTEVASKAGTTKKVAESVLDATLEAIIDSVAEGQKVTLVGFGSFEARKRQAREG
RNPGTGDPLHIPAKTVPTFSAGKLFREKVADGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgaataaggaagaattggtcactgaagtcgcctcgaaagcggggacaaccaaaaaggtg
gctgagtcggtgttggatgcgaccctagaagcgattatagactcggttgccgaaggccaa
aaagtgaccttggtggggtttggctcttttgaagcccgcaaacggcaagcacgggaaggt
cgcaatcccggtaccggtgacccgcttcacattcctgccaaaactgtgccgacgttttcc
gctgggaaattatttcgcgaaaaagtggctgatgggggttga

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