Gloeomargarita lithophora: GlitD10_0958
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Entry
GlitD10_0958 CDS
T09871
Symbol
rnd
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
glt
Gloeomargarita lithophora
Brite
KEGG Orthology (KO) [BR:
glt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
glt03016
]
GlitD10_0958 (rnd)
Enzymes [BR:
glt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GlitD10_0958 (rnd)
Transfer RNA biogenesis [BR:
glt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GlitD10_0958 (rnd)
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DNA_pol_B_2
Motif
Other DBs
NCBI-ProteinID:
APB33276
UniProt:
A0A1J0ABG4
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All DBs
Position
980056..980694
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AA seq
212 aa
AA seq
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MPNNMAGNSHFCEQDLSAEFLAHYQQQTVLGVDTETMGLIPVRDRLCLVQISDAAGQTTL
VKILPGQTQAPHLQTLLETPDILKIFHYARFDLATLRYHLNIQVQPIFCTKIASKIARTY
SPKHGLKEVVQELVGVELDKQSQSSDWGRPDALRPEQLAYAANDVIYLPQVAEQLTAMLQ
REGRWQLTQQCFQCVPTIVSLDLLNYQGIFEH
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgccaaataatatggccggaaattcccacttttgcgaacaggatttatccgccgaattt
ctcgcccattaccaacaacaaactgttttgggtgtggatacggaaaccatgggcttgatc
cccgttcgggatcggctgtgtttggtgcaaattagtgatgcggcgggacagaccacccta
gtaaaaattctgccgggacagacccaagccccccatttgcaaaccctgttggaaacccct
gacattctcaaaatttttcactatgcccggtttgatttagcgaccttacgttaccacttg
aatatccaagtacaacccattttttgtaccaaaattgccagcaaaatcgcccgtacctat
tccccaaaacacgggttaaaagaggtcgtgcaggaactcgtgggcgttgaattggataaa
caatcccaatcttcggattgggggcgaccggatgccctgcgcccggaacaactggcctat
gccgccaatgatgtgatttatttaccccaagttgctgagcagttaaccgctatgttgcaa
cgggaaggccgctggcaattgacgcaacagtgttttcagtgtgtgcccaccatcgtgagc
ttagatttattaaactatcagggaatttttgaacattag
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