Gloeomargarita lithophora: GlitD10_2052
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Entry
GlitD10_2052 CDS
T09871
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
glt
Gloeomargarita lithophora
Brite
KEGG Orthology (KO) [BR:
glt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
glt03032
]
GlitD10_2052 (topA)
03400 DNA repair and recombination proteins [BR:
glt03400
]
GlitD10_2052 (topA)
Enzymes [BR:
glt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GlitD10_2052 (topA)
DNA replication proteins [BR:
glt03032
]
Prokaryotic type
DNA Topoisomerases
GlitD10_2052 (topA)
DNA repair and recombination proteins [BR:
glt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GlitD10_2052 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
APB34378
UniProt:
A0A1J0AEK9
LinkDB
All DBs
Position
complement(2085943..2088567)
Genome browser
AA seq
874 aa
AA seq
DB search
MPRSRATSAPPLNGQPTLVIVESPTKARTIRQYLPDNYRVEASMGHVRDLPQSASDIPAE
LKGQDWATLGVNVQQSFEPLYIVPGEKKKVVSNLKAALKEVKELILATDEDREGESISWH
LAQILQPRVPVKRMVFHEITQEAIHAALQQCRQVDEGLVRAQETRRILDRLVGYTLSPLL
WQKVGPGLSAGRVQSVAVRLLVQRERQRRAFRTAEYWDLKAQLTAHQTPFESRLVALGGV
KLATGQDFDPQTGELLPRRRVRVLDQTQAETLCQQLQGSTWRVQDLESRQVQRKPAPPFT
TSTLQQEANRKLRLSTRDTMRIAQNLYEQGYITYMRTDSVHLSQQAITAARSCVQQMYGA
SYLSPKPRQYATQSKGAQEAHEAIRPAGSDFRTPQVTGLTGRELALYDLIWKRTVATQMA
EARLTHLTVTIQAGEAEFRTSGKRIDFPGFFRAYVEGSDDPQAALDDQEISLPPLAVGDT
PQCTRLEALRHETQPPDRYTEASLVKTLESEGVGRPSTYASIIGTIQDRGYAQTEGNALV
PTFTAFAVTTLLEQNFPHLVDTGFTAQMEQTLDDIAGGEVPWLPYLQEFYLGEQGLASRV
KTQAATISPTTARTLELEGLGEAKVHISTRYGPYVEIPQNGEVVTVSLPKDLTPAQLTPQ
VIEELLRQKTAGPTKLGMHPETGEPIFALTGTYGPYVQLGEATEINKKPKRASLPKGVTP
EQVTLEMAVGLLALPRALGAHPAGGKVKAGLGRFGPYVVHDRGKESQDFRSLKPEDDVLS
VTLERALELLAQPKASRGRSSSTPLRELGAHPQDKEPVNVYQGPYGYYVKHGKVNAGLPD
GTTPETVTLAQAVELLAQRSQNPRKKATTRRKKS
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgccccgttcccgtgccacctctgccccgccgctcaacggccagcccaccctagtgatc
gtggaatcccccacgaaagcccgcaccatccgccagtatttaccggacaattatcgggtg
gaagcttcgatgggtcatgtgcgggatttaccccaatccgccagcgacatccccgccgaa
ctcaaaggccaggattgggcaaccctaggcgtgaacgtccaacagagctttgaacccctg
tacatcgtgccgggggagaaaaagaaggtggtcagcaacctcaaggccgccttaaaagaa
gttaaagaattgatcctggcaacggacgaagaccgggagggggaaagcattagctggcat
ctggcgcagattttgcaaccccgggtgccggtgaagcgcatggtcttccacgaaattacc
caagaggcgatccatgccgccctgcaacagtgccgccaggtggatgaggggttggtgcgg
gcgcaggaaacccgccgcatcctggatcgcttggtgggctacaccctctcgcccctgctg
tggcaaaaggtcgggccggggttgtccgccgggcgggtgcaatcggtagcggtgcggtta
ctcgtgcagagggagcggcagaggcgggcatttcggacagcagaatactgggatttgaag
gcgcagttgaccgcccaccagaccccctttgagtcccggttggtggccctggggggggta
aaactcgccaccggtcaggattttgacccccaaaccggcgaacttctgccccggcgccgg
gtgcgggtcttggatcaaacccaggcggaaaccctctgccagcaactccaggggtcaacc
tggcgggtgcaagacctggaatcccggcaagtccagcgcaaacccgcccccccttttact
acctccaccctgcaacaggaagccaaccgcaaactgcggctctccacgcgggacaccatg
cgaattgcccagaatttgtacgaacaggggtatatcacctatatgcgtaccgactcggtg
catttatcccagcaggccatcaccgctgcccgcagttgtgtccagcaaatgtatggcgca
agttacctcagccccaagccccggcagtacgctacccaaagcaagggtgcccaggaagcc
cacgaagctattcgccccgccgggagtgattttcgcaccccgcaggtaaccggtttaacc
gggcgggaattggccttatacgatttaatctggaagcgcacggtggcgacccagatggcg
gaagcccgcttaacccatctgacggtgacgatccaggcgggggaggcggaatttcgcacc
agcggcaaacgcattgatttccccggctttttccgggcctacgtggaaggctccgacgac
ccgcaagccgccctggatgaccaggaaattagcctgccgcccctagccgtcggggatacg
ccccaatgcacccgcctggaagccctgcgccacgaaacccagccccccgaccgctacacg
gaagcctccctggtaaaaaccctggagagcgaaggggttggccgtcccagtacctacgcc
agcattatcggcaccatccaagaccggggctacgcccaaaccgaggggaatgccctggtg
cccaccttcaccgcctttgccgtcaccaccctcctggagcaaaatttcccgcacttggtg
gacaccgggttcaccgctcaaatggaacaaaccctcgatgacatcgccgggggagaagta
ccgtggttgccttatttgcaggaattttacctgggggaacaggggttagccagccgggta
aaaacccaggcggccaccatcagccccaccaccgcccgcaccttggagttagaaggactg
ggagaagccaaggttcacatcagcacccgttatggcccctatgtggaaattccccaaaac
ggcgaagtggtcacggtttccctgcccaaagacctgactccggcgcaattgaccccccag
gtcatcgaagaactcctgcgccaaaaaaccgcaggccccaccaaattggggatgcacccg
gaaaccggcgaaccgatttttgccctcaccggcacctatggcccctacgtgcagttgggg
gaagccacggaaatcaacaaaaaacccaagcgcgcctccctacccaagggcgtaaccccg
gagcaggtgacgttagaaatggcggtggggttgttggccttgccccgtgccctgggggcg
catcccgcaggcggcaaagtcaaagccggactggggcggtttggcccctatgtcgtccac
gaccggggtaaagaaagccaagacttccgttccctcaaacccgaagatgatgtgttgagc
gtcaccctggagcgagccttagaactattggcgcaacccaaggccagtcgaggacgaagc
agtagtacgcccttgcgggaactgggtgcccatccccaggacaaggagccggtgaatgtt
taccaaggtccctacggctactacgtcaaacacggcaaggtcaatgcggggctacccgac
ggcaccaccccggaaacagttaccctggcgcaggcggtggaattgttagcccaacggagc
caaaacccccgtaaaaaggcaaccacccgccgcaagaaaagctag
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