Gloeomargarita lithophora: GlitD10_2367
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Entry
GlitD10_2367 CDS
T09871
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
glt
Gloeomargarita lithophora
Brite
KEGG Orthology (KO) [BR:
glt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GlitD10_2367 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glt03021
]
GlitD10_2367 (rpoD)
Transcription machinery [BR:
glt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GlitD10_2367 (rpoD)
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Ortholog
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GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
GPW_gp25
Motif
Other DBs
NCBI-ProteinID:
APB34701
UniProt:
A0A1J0AFK3
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Position
2422514..2423638
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AA seq
374 aa
AA seq
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MTQVRNVLPTLADPSLDDLGDAPGDDLSDLELLDELDDSDEESVTPARSGGKRVGAKKNP
YTEDSIRLYLQEIGRIRLLRADEEIELARQIASLLEFERQREDWIHQHGYLPSEADWAAV
VGLPLGDFQRQLRQGYRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAE
KFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMGRK
PTEEEIATRMEITIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDQVAKH
LLREDLENVLNTLSARERDVLRLRYGLDDGRMKTLEEIGQTFNVTRERIRQIEAKALRKL
RHPNRNSILKEYIR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggtgcgtaatgtcctcccaacccttgctgacccgtctctcgatgacttaggc
gatgcccctggggatgacctgagcgacctggaactcctagacgagttggatgactcggac
gaggagagtgtgacccccgcccgctccggggggaaacgggtgggggcgaagaaaaatccc
tacacggaagactcgattcgcctgtatctgcaagaaattggccggattcgtctgttgcgg
gcggatgaggagatcgaactggcgcggcaaattgccagtctgcttgaatttgaacggcaa
cgggaggactggattcaccagcatggctatctccccagcgaggcggattgggcggcggtg
gtgggtttgcccttgggggattttcagcggcagttgcgccagggctatcgggcgaaggaa
aagatggtgcagtccaatctacggttggtggtttcgattgccaaaaagtatatgaaccgg
gggctatccttccaggatttgatccaggagggcagtttgggtttgatccgcgccgccgaa
aaatttgaccacgaaaagggttacaaattttccacctatgcgacctggtggattcgccag
gccatcaccagagcgattgccgaccagtcccgcaccatccgtctgccggtgcatctctac
gagacgatttctcgcatcaaaaaaaccaccaaaattctttcccaggaaatgggtcgcaaa
cccacggaagaagaaattgccacccgcatggaaattaccattgaaaaactccggtttatt
gccaaatctgcccaactccctatttcgttagaaacccccatcggtaaggaagaggattcc
cggttgggggattttattgaagcggatggggaaacccccgaagaccaagtggccaagcat
ctcctgcgggaggatttagaaaatgttttgaatactttgagtgcccgggagcgggatgta
ttgcgtttgcgctatggcttagacgatggccgcatgaaaacgttagaagaaatcggccaa
acgttcaatgtcactcgcgaacgcatccggcaaattgaggccaaagccctccggaaactg
cgccaccccaaccgcaatagcattctcaaagagtacatccgctag
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