Gloeomargarita lithophora: GlitD10_2508
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Entry
GlitD10_2508 CDS
T09871
Symbol
hupB-2
Name
(GenBank) nucleoid protein Hbs
KO
K03530
DNA-binding protein HU-beta
Organism
glt
Gloeomargarita lithophora
Brite
KEGG Orthology (KO) [BR:
glt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
glt03032
]
GlitD10_2508 (hupB-2)
03036 Chromosome and associated proteins [BR:
glt03036
]
GlitD10_2508 (hupB-2)
03400 DNA repair and recombination proteins [BR:
glt03400
]
GlitD10_2508 (hupB-2)
DNA replication proteins [BR:
glt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GlitD10_2508 (hupB-2)
Chromosome and associated proteins [BR:
glt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GlitD10_2508 (hupB-2)
DNA repair and recombination proteins [BR:
glt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GlitD10_2508 (hupB-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Pox_C4_C10
Motif
Other DBs
NCBI-ProteinID:
APB34845
UniProt:
A0A1J0AFZ8
LinkDB
All DBs
Position
2565483..2565758
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AA seq
91 aa
AA seq
DB search
MNKGELVDLVSQNADLPKKMVDAVISEVFNTIIETVSTGEKVTLVGFGSFEARKRQAREG
RNPRTGEPMQIPATQVPAFSAGKQFKDRVSV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggtgaattggttgacttggtgtcacaaaatgctgacctgcccaaaaagatg
gtagatgccgtcattagtgaggtattcaacaccatcatcgagacggtttccaccggggaa
aaagtgactttggtgggctttggttcctttgaagcccgcaaacgccaagcccgggaaggc
cgcaatcctcgcacgggcgaacccatgcagattcccgccacccaggtgccagccttttcg
gcgggtaaacagttcaaagaccgggtatcggtgtag
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