Gloeomargarita lithophora: GlitD10_2636
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Entry
GlitD10_2636 CDS
T09871
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
glt
Gloeomargarita lithophora
Pathway
glt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
glt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GlitD10_2636 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glt03400
]
GlitD10_2636 (fpg)
Enzymes [BR:
glt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GlitD10_2636 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GlitD10_2636 (fpg)
DNA repair and recombination proteins [BR:
glt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GlitD10_2636 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
APB34977
UniProt:
A0A1J0AGA4
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All DBs
Position
2686718..2687557
Genome browser
AA seq
279 aa
AA seq
DB search
MPELPEVEIIRRGLVSLTPGLTIAEVELLRPDCVVGAAPEFTAGLCHQVLQDWQRRGKYL
LGKLSNGGGWVVHLRMTGQLLWLTTPQPVTKHTRARIFFTGGQELRFVDQRTFGRLWWVA
PGQALTQVVTGLQNLGLEPWDCSAEILYPKCQRTRRAIKSALLDQTWIAGLGNIYADECL
FLSGIDPQTPCQDLSAPQVAQLHQAIVRVLETSIQAGGTTFAHFRHVQGMNGHYLDQAWV
YGRAGQPCRVCGTAIQRQKIAGRSSHFCPRCQPKRLTRH
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
ttgccagagctaccggaagttgagattattcgccgggggttggttagcctgacccctggt
ttgaccattgctgaagtggaattactccgcccggactgtgtggtgggtgccgcccccgaa
tttaccgccggtttgtgccatcaagtcctccaagactggcagaggcggggcaagtatcta
ttgggcaaattaagcaacggcggcgggtgggtggtgcatctgcggatgacggggcagttg
ttgtggttgacgaccccccaaccggtgacgaaacacacccgggcgcggatttttttcacc
ggggggcaggaattgcggtttgttgaccagcgcacctttggccgtctgtggtgggtagca
ccggggcaagccttaacccaggtggtgacggggctgcagaacctggggctggaaccctgg
gattgttcagcggaaattttatacccaaaatgtcagcgcacccgccgagcgattaaatcg
gctcttttggatcaaacctggatcgccggattggggaatatctacgccgatgaatgttta
tttttgagtggcattgacccgcaaactccttgtcaagatttatctgccccgcaggttgcc
caactgcaccaggccattgtgcgtgtcctggaaaccagcatccaggcgggggggacgacc
tttgcccactttcgccatgtgcaggggatgaacggccattacctggatcaagcctgggtt
tatgggcgggcgggacaaccctgccgggtgtgtggcacggccattcaacgccagaaaatc
gctggccgctccagccatttttgcccccggtgtcaacccaaacggctgaccaggcattga
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