Gloeomargarita lithophora: GlitD10_2680
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Entry
GlitD10_2680 CDS
T09871
Symbol
alkA
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
glt
Gloeomargarita lithophora
Pathway
glt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
glt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GlitD10_2680 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glt03400
]
GlitD10_2680 (alkA)
Enzymes [BR:
glt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GlitD10_2680 (alkA)
DNA repair and recombination proteins [BR:
glt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GlitD10_2680 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Prp18
Motif
Other DBs
NCBI-ProteinID:
APB35023
UniProt:
A0A1J0AGH8
LinkDB
All DBs
Position
complement(2731232..2731894)
Genome browser
AA seq
220 aa
AA seq
DB search
MRRQETHRHPPHDNRTIITLETLAQGLSALNRQDQVLAQVYAQVQTPPLWLRTPGLATLV
QIILEQQVSLKSAQATFNRLQNICQPLSAPGLLKLTADEWRTCGVSRQKSTYLCHLATAL
ETNTLDLEILTALDDAIVHQQLTQICGIGTWTANIYLLMALGRPDVWPTGDLALVVSIKN
LYQLPDKITTKELDKLTETWRPWRAVAARLLWQYYLKYLR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggcaagaaacccatcgtcaccctccgcacgacaatcgaactatcattacgtta
gaaacgttagcccagggtttaagcgcattaaaccggcaggatcaggtgctggcgcaggtt
tatgcccaggtgcagactccccctttatggttacgaacaccaggactggcgactctagtg
caaattattttggagcaacaggtttccctaaaatccgcccaagctacctttaatcggttg
caaaatatctgccaacccttgtctgcacccggcttattaaaattaactgctgacgagtgg
cgcacctgtggagtcagccgccaaaaaagcacttatctatgtcatctggcaacggcttta
gagacaaacacccttgatttagagatattaactgctttagatgatgccatcgtgcatcaa
caattaacccaaatttgcggcatcggcacctggactgccaacatttatttattgatggct
ttgggtcgtcccgatgtgtggcctacgggggatttagccctggttgttagcatcaaaaac
ctctatcaattgccagataaaattaccacaaaagagttggataaactaactgaaacctgg
cgaccttggcgggcggtggccgctcgtttattatggcagtattacctgaaatatttgcgt
taa
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