Gloeomargarita lithophora: GlitD10_2729
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Entry
GlitD10_2729 CDS
T09871
Symbol
phrB-3
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
glt
Gloeomargarita lithophora
Brite
KEGG Orthology (KO) [BR:
glt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glt03400
]
GlitD10_2729 (phrB-3)
Enzymes [BR:
glt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GlitD10_2729 (phrB-3)
DNA repair and recombination proteins [BR:
glt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GlitD10_2729 (phrB-3)
Prokaryotic type
GlitD10_2729 (phrB-3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
APB35072
UniProt:
A0A1J0AGP2
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All DBs
Position
complement(2779612..2781063)
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AA seq
483 aa
AA seq
DB search
MPECILFWHRRDLRIEDSVGLHTARLHTPKVIGVFCFDPQILNRDDMAPVRVYYLRECLA
DLQQQYEQAGSELLILWADPIQAIPRLAQALQAGVYWHQDVEPYGRQRDQGVNQALNEQG
IVQRQFWDQLLHAPAEIATKVGQPYTVFTPFWKNWSQQDKVAPYPKLENCTKLTEIERQV
VQNAGAIPLPSLKELGFDWPGQWDYQPGAEGANNLLAEFGRSAIYSYQEQRNFPAILGTS
RLSAALKFGVIGIRSLWQFTQDCLQNFPGNESVIVWQQELAWREFYQHGMYHFPRLATHS
HRAQFDDFAWENNQAYFQAWCAGETGYPIVDAAMRQLNQTGWMHNRCRMIVASFLTKDLL
IDWRWGERYFMQNLIDGDLSANNGGWQWSASVGMDPRPLRIFNPNTQATKFDPEAEYIYT
WVPELRSVDVPQILSNQITPLERQALGYPEPIVNHQKQQQLFKQKYQLIPRAGEGNFGRE
AEV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccagagtgtatcttgttttggcaccggcgggatttacgaatcgaagatagtgttggt
ctgcataccgcccgtttacacacgcccaaagtgataggagtcttctgttttgatccccaa
attttgaatcgggatgatatggcaccggtgcgggtctattatctgcgggaatgtctagcg
gatttacagcaacagtatgaacaggctgggagtgaattgctgatactttgggctgacccc
atccaagccattccccgtttggcgcaggcattgcaagcgggggtgtactggcatcaggat
gtggaaccctacggtcgtcaacgggatcaaggggtgaaccaggcattaaatgaacagggg
attgtccagcggcaattttgggatcaactgctccatgcacccgctgaaattgcgactaaa
gtggggcaaccctacacggtttttacgcccttttggaagaattggtcacagcaagataaa
gttgcgccctatccaaagttagaaaactgtacaaaactcacggaaatagaacgtcaagtt
gttcaaaacgctggggcaattcccttgccgagtttgaaggaattgggttttgattggcca
gggcaatgggactatcaaccaggtgctgagggggcaaataatttactagcggaatttggt
cgctctgcgatttatagctatcaggagcagaggaattttcccgccattttaggaacctct
cgtttgagtgccgccctaaaatttggggtgattggtatccgctctctttggcaattcacc
caggattgtttgcaaaatttcccaggcaatgaatcagtaattgtttggcaacaggaattg
gcctggcgggaattttatcagcacgggatgtatcattttccccggttggcaacccacagt
catcgggcgcaatttgatgattttgcctgggagaataatcaagcgtatttccaagcctgg
tgtgcgggcgaaacgggctatcccattgtagatgcggccatgcggcaattgaatcaaacc
ggctggatgcacaaccggtgtcggatgattgtcgccagttttttgaccaaggatttattg
attgattggcgctggggagaacgttattttatgcagaatttgattgatggggatttaagt
gccaataatggtggttggcaatggagtgcttctgtagggatggatccccggcctttgcgg
atttttaaccccaatacccaggcgactaaatttgacccggaggcggagtatatctatact
tgggtgccggagttgcgctctgtggatgtgccgcaaattttgagcaatcaaataacacct
ttagagcggcaagcattaggttatcctgaacccatcgtcaaccatcaaaaacaacagcaa
ttattcaagcaaaaatatcagttgattccccgtgcgggtgaggggaactttgggcgggaa
gctgaggtctga
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