KEGG   Glutamicibacter sp. ZJUTW: F0M17_05390
Entry
F0M17_05390       CDS       T06225                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
glu  Glutamicibacter sp. ZJUTW
Pathway
glu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:glu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F0M17_05390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:glu03019]
    F0M17_05390
Messenger RNA biogenesis [BR:glu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     F0M17_05390
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QEP06715
LinkDB
Position
1139538..1141244
AA seq 568 aa
MTESSVGKADAARMQTPAKLKKGTMRIVPLGGLGEVGRNMTVFELNGKLLIVDCGVLFPE
EHQPGVDLILPDFSYIKDRLDDVVGLVLTHGHEDHIGAVPYLLRLREDIPLYGSKLTLAF
VEAKLAEHRIKANTNIVVEGEIAQVGNFECEFVAVNHSIPDALAVFLRTEAGTVLHTGDF
KMDQLPLDGRITDLRHFARLGEEGVDLFLPDSTNAEVPGFTVAEREIGPVLEAKFARARR
RIIVASFSSHVHRVQQVLDAAAMHGRKVAFIGRSMVRNMGIAERLGYLDVPQGVLVDLKQ
IDSLPDHKVVLMSTGSQGEPMAALSRMANGEHKVQVNPGDTVILASSLIPGNENSVFRVI
NGLMRLGAEVIHKGMAKVHVSGHASAGELLYCYNILRPKNVLPVHGETRHLIANGRLAAQ
AGVPEDNVLLADDGSVIDMKDGVAKLVGQVECGYVYVDGSKVGTITDDDLKDRVTLGEEG
FISVITVINRQNGTIISGPDIHARGVAEEDSVFNEIKPKIAAAIVEAVGNNPNHTTHQLQ
QITRRVIGSWVSRKLRRRPMIVPVVLEA
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgactgagagttcagtaggcaaggctgacgctgcgcgtatgcagactccggcgaagctg
aagaaggggacaatgcgcattgttcccctcggcggcttgggcgaggtcggccgaaacatg
accgtattcgaactcaacgggaaactgttgatcgtcgactgcggcgtgctcttccccgaa
gagcaccagcctggcgtggatctgatcctgccggacttctcctacatcaaggaccgcctg
gacgacgtggtgggcctcgtgctgacccacggccacgaggaccatatcggtgctgttcct
tacctgctgcgcctgcgcgaagacatccctttgtacgggtccaagctgaccctggccttc
gttgaagcaaagctggcagaacaccgcatcaaggccaacaccaacatcgtggtggagggc
gagatcgcgcaggttggcaacttcgaatgcgaattcgttgccgtgaaccactcgatcccc
gacgccctggcagtattcctgcgcaccgaggccggcaccgtgctgcacaccggcgacttc
aagatggaccagctgccgctggacggccgcatcaccgacctgcgccacttcgcgcgtctg
ggcgaggaaggcgtggacctgttcctgccggactccaccaacgccgaagtcccgggcttc
accgtggccgaacgcgagatcggcccggtcctcgaagccaagttcgcgcgcgcccgccgc
cgcatcattgtcgcgtccttctcctcgcacgtgcaccgtgtgcagcaggtgctggatgcg
gccgcgatgcacgggcgcaaggttgccttcatcggccgctcgatggtgcgcaacatgggc
atcgccgaacgcctgggctacctcgacgtgccgcagggcgtgctggtcgacctgaagcag
atcgactcgctgccggaccacaaggtcgtgctgatgtccaccggttcgcagggcgagccg
atggccgccctgtcccgcatggccaacggcgagcacaaggtccaggtcaacccgggcgac
accgtcatcctggcctccagcttgatcccgggcaacgagaactcggtcttccgcgtgatc
aacggcctgatgcgcctgggcgcggaggtcatccacaagggcatggccaaggtccacgtt
tccggccacgcatcggctggcgaattgctgtactgctacaacatcctgcgcccgaagaac
gtgctcccggtgcacggcgaaacccgccacctgattgccaacggccggctggccgcgcag
gccggtgtcccggaggacaacgtgctgctggcagacgacggttcggtcatcgacatgaag
gacggcgttgcgaagctcgtcggccaggtcgaatgcggatacgtctacgttgacggctcc
aaggtcggcaccatcaccgacgatgacttgaaggaccgcgtcaccctgggcgaggaaggc
ttcatctcggtcatcaccgtgatcaaccgccagaacggcacgatcatctccggcccggac
atccacgcacgcggtgtggcggaagaggactcggtcttcaacgagatcaagccgaagatt
gcagccgcgattgtggaagcagtgggcaacaacccgaaccacaccacgcaccagctgcag
cagatcacccgccgcgtgatcggctcgtgggtatcgcgcaagctgcgccgccgcccaatg
atcgtcccggtagtgctcgaagcctag

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