Glutamicibacter sp. ZJUTW: F0M17_05390
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Entry
F0M17_05390 CDS
T06225
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
glu
Glutamicibacter sp. ZJUTW
Pathway
glu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0M17_05390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glu03019
]
F0M17_05390
Messenger RNA biogenesis [BR:
glu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F0M17_05390
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Paralog
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QEP06715
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Position
1139538..1141244
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AA seq
568 aa
AA seq
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MTESSVGKADAARMQTPAKLKKGTMRIVPLGGLGEVGRNMTVFELNGKLLIVDCGVLFPE
EHQPGVDLILPDFSYIKDRLDDVVGLVLTHGHEDHIGAVPYLLRLREDIPLYGSKLTLAF
VEAKLAEHRIKANTNIVVEGEIAQVGNFECEFVAVNHSIPDALAVFLRTEAGTVLHTGDF
KMDQLPLDGRITDLRHFARLGEEGVDLFLPDSTNAEVPGFTVAEREIGPVLEAKFARARR
RIIVASFSSHVHRVQQVLDAAAMHGRKVAFIGRSMVRNMGIAERLGYLDVPQGVLVDLKQ
IDSLPDHKVVLMSTGSQGEPMAALSRMANGEHKVQVNPGDTVILASSLIPGNENSVFRVI
NGLMRLGAEVIHKGMAKVHVSGHASAGELLYCYNILRPKNVLPVHGETRHLIANGRLAAQ
AGVPEDNVLLADDGSVIDMKDGVAKLVGQVECGYVYVDGSKVGTITDDDLKDRVTLGEEG
FISVITVINRQNGTIISGPDIHARGVAEEDSVFNEIKPKIAAAIVEAVGNNPNHTTHQLQ
QITRRVIGSWVSRKLRRRPMIVPVVLEA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgactgagagttcagtaggcaaggctgacgctgcgcgtatgcagactccggcgaagctg
aagaaggggacaatgcgcattgttcccctcggcggcttgggcgaggtcggccgaaacatg
accgtattcgaactcaacgggaaactgttgatcgtcgactgcggcgtgctcttccccgaa
gagcaccagcctggcgtggatctgatcctgccggacttctcctacatcaaggaccgcctg
gacgacgtggtgggcctcgtgctgacccacggccacgaggaccatatcggtgctgttcct
tacctgctgcgcctgcgcgaagacatccctttgtacgggtccaagctgaccctggccttc
gttgaagcaaagctggcagaacaccgcatcaaggccaacaccaacatcgtggtggagggc
gagatcgcgcaggttggcaacttcgaatgcgaattcgttgccgtgaaccactcgatcccc
gacgccctggcagtattcctgcgcaccgaggccggcaccgtgctgcacaccggcgacttc
aagatggaccagctgccgctggacggccgcatcaccgacctgcgccacttcgcgcgtctg
ggcgaggaaggcgtggacctgttcctgccggactccaccaacgccgaagtcccgggcttc
accgtggccgaacgcgagatcggcccggtcctcgaagccaagttcgcgcgcgcccgccgc
cgcatcattgtcgcgtccttctcctcgcacgtgcaccgtgtgcagcaggtgctggatgcg
gccgcgatgcacgggcgcaaggttgccttcatcggccgctcgatggtgcgcaacatgggc
atcgccgaacgcctgggctacctcgacgtgccgcagggcgtgctggtcgacctgaagcag
atcgactcgctgccggaccacaaggtcgtgctgatgtccaccggttcgcagggcgagccg
atggccgccctgtcccgcatggccaacggcgagcacaaggtccaggtcaacccgggcgac
accgtcatcctggcctccagcttgatcccgggcaacgagaactcggtcttccgcgtgatc
aacggcctgatgcgcctgggcgcggaggtcatccacaagggcatggccaaggtccacgtt
tccggccacgcatcggctggcgaattgctgtactgctacaacatcctgcgcccgaagaac
gtgctcccggtgcacggcgaaacccgccacctgattgccaacggccggctggccgcgcag
gccggtgtcccggaggacaacgtgctgctggcagacgacggttcggtcatcgacatgaag
gacggcgttgcgaagctcgtcggccaggtcgaatgcggatacgtctacgttgacggctcc
aaggtcggcaccatcaccgacgatgacttgaaggaccgcgtcaccctgggcgaggaaggc
ttcatctcggtcatcaccgtgatcaaccgccagaacggcacgatcatctccggcccggac
atccacgcacgcggtgtggcggaagaggactcggtcttcaacgagatcaagccgaagatt
gcagccgcgattgtggaagcagtgggcaacaacccgaaccacaccacgcaccagctgcag
cagatcacccgccgcgtgatcggctcgtgggtatcgcgcaagctgcgccgccgcccaatg
atcgtcccggtagtgctcgaagcctag
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