Glutamicibacter sp. ZJUTW: F0M17_11600
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Entry
F0M17_11600 CDS
T06225
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
glu
Glutamicibacter sp. ZJUTW
Pathway
glu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
glu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F0M17_11600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glu03021
]
F0M17_11600
03400 DNA repair and recombination proteins [BR:
glu03400
]
F0M17_11600
Enzymes [BR:
glu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F0M17_11600
Transcription machinery [BR:
glu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F0M17_11600
DNA repair and recombination proteins [BR:
glu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F0M17_11600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
AmyA-gluTrfs_C
Big_5
Motif
Other DBs
NCBI-ProteinID:
QEP07826
UniProt:
A0A5C2FLK2
LinkDB
All DBs
Position
complement(2455434..2459324)
Genome browser
AA seq
1296 aa
AA seq
DB search
MSSDSSFGLMRINLATADEIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRANVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVNEERRHAEMPNLQAQHDLELRNLANNAEADKKAVAADLEAE
LERMEAEGAKNAELNKARTLAEKTVLQIDKRAKAEAERLRAVWERFKNLKVADLEGDEGL
YRTMREKYGLFFEGSMGAEAIQKRLENFDLAAEAEELKTVIENGKGQKKARALKRLKVVN
AFLANGNSPKGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMMQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLIEGKALQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSHNILKPSDGRPVAQPSQDMIIGLHHLTTKRPNEKGAGR
VFATVSEAIMAKDLGELHLNAPIKVRVENFVPSADQPAPEGWEPGTPALLETSLGQVLFN
DTLPADYPWVATVAGKDALSEIVNDLAERYPKIVAAATLDNLKDAGFYWSTRSGVTVAIS
DITSNMDKTAILAPYEEKAAKVQASYDKGLIADTERRQDLIDIWTKATDEVAEAMKNGME
ELNTINRMVTSKARGNYLQLRQIAGIRGLVSNPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALKTANSGYLTRRLVDVSQDVIVREEDCGTKRGLTVAIADNSAGIRVKHET
VENSAYTRTLAADVKDAEGNVLATAGSDVGDVLIDELYAAGVDEIRVRSVLTCDSAVGTC
ALCYGRSLASGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRIQE
LFEARTPKGVAPMSEVAGRVSIEDDEKQLRVVVTPDNGDEKQAYPVLRRARLLVEEGESI
AAGTQLTSGTLDPKQVLRVLGPREAQKFLVREVQDVYQSQGVGIHDKHVEVIVRQMLRRV
TVIESGDTDLLPAELADRSRFTAANRKAVSEGKRPAAGRDEMMGITKASLATDSWLSAAS
FQETTRVLTQAAMEGKEDPLRGLKENVIIGKLIPAGTGLDRYTQVNVEPTDEAKATLFTG
TSAFSSGLYDDALEGGLSPEFRAISMDDYDHGSDFR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgattcctcattcggcctcatgcgaatcaaccttgccaccgcggatgaaatc
cgtggctggagctacggcgaggtcaagaagccggaaaccatcaactaccgcaccctgaag
ccggagaaggacggtcttttctgcgaaaagatcttcggcccttcccgcgactgggaatgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgttgcggcgtc
gaggtgacccgcgcgaacgtacgccgtgagcgcatgggccacatcgagcttgcagcccca
gtgacccacatctggtacttcaagggcgttccatcgcgcttgggctacctgcttgatctg
gctccgaaggacctcgaaaaggtcatctacttcgctgcctacatgatcaccagcgtgaac
gaggaacgtcgtcacgccgagatgccgaacctgcaggcccagcacgacctggagctgcgc
aaccttgcgaacaacgcggaagccgacaagaaggctgttgcagccgacctggaagccgag
ctggagcgcatggaagcagaaggcgccaagaacgccgagctgaacaaggcacgcaccctg
gccgagaagactgttctgcagatcgacaagcgcgccaaggccgaggccgagcgcctgcgt
gcggtttgggagcgcttcaagaacctgaaggtcgccgacctggaaggcgacgaaggcctg
taccgcaccatgcgtgagaagtacggactgttcttcgagggctccatgggtgcagaagcc
atccagaagcgcctggagaacttcgacctggcggccgaagctgaagagctgaagaccgtg
atcgagaacggcaagggccagaagaaggcccgcgccctcaagcgactcaaggtcgtcaac
gcgttcctggccaacggcaactcgcccaagggcatggtcctcgacgctgttccggtgatc
ccgccagaactgcgcccaatggtccagctcgacggtggccgtttcgccacctcggacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcgcctgcttgatctc
ggcgcgcctgagatcatcgtgaacaacgaaaagcgcatgatgcaggaagctgttgactcg
ctgttcgacaacggccgccgcggccgtccggtcaccggtccaggcaaccgtccgctcaag
tccctgagcgacatgctcaagggcaagcagggccgcttccgccagaacctgctgggcaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctgaagctgcaccag
tgcggcctgccgaagcagatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcacagaacatcaagtcggccaagcgcatggttgagcgctaccgt
ccgcaggtgtgggatgtccttgaagagatcatcaccgagcacccggtactgctgaaccgt
gcaccgaccctgcaccgcttgggcatccaggccttcgaaccacagctgatcgaaggcaag
gccctgcagctgcacccattggtctgcggcgcgttcaacgccgacttcgacggcgaccag
atggcagtgcacctgccgctgagcccagaagcccaggctgaagcacgcatcttgatgctg
tcctcgcacaacatcttgaagccttccgatggccgcccagtggcacagccttcgcaggat
atgatcatcggcttgcaccacttgaccaccaagcgtccaaacgaaaagggcgccggccga
gtattcgccaccgtttccgaggccatcatggccaaggatctgggcgagctgcacctgaac
gcaccgatcaaggtccgcgtggagaacttcgttccttccgcagaccagccagcccctgag
ggttgggagccaggtaccccggcactgctggagacctcgctcggccaggtgctgttcaac
gacaccctgcctgcggactacccatgggttgccaccgtggccggcaaggatgcgctttcg
gagatcgtgaacgatttggcagagcgctacccgaagatcgttgcagctgccaccctggac
aacctgaaggacgccggtttctactggtcgacccgttcgggtgtcaccgtggcgatctcg
gacatcacctcgaacatggacaagaccgcaattcttgctccatacgaggagaaggccgcc
aaggtccaggcttcctacgacaagggcctgattgccgataccgaacgccgccaggacctg
atcgacatctggaccaaggctaccgacgaggttgccgaggcgatgaagaacggcatggaa
gagctgaacaccattaaccgaatggtgacttccaaggctcgcggtaactacctgcagctg
cgtcagatcgcgggtatccgtggtctggtgtccaaccccaagggcgagatcatcccgcgc
ccgatcaagtcctcgtaccgcgaaggcttgtcggttctggagtacttcatcgctacccac
ggcgcccgcaagggcctggcggataccgcgctgaagaccgcgaactcgggctacctgacc
cgtcgcctggtcgacgtttcgcaggatgtcatcgttcgcgaagaggactgcggcaccaag
cgcggcctgaccgttgccatcgcggacaactccgccggcatccgtgtcaagcacgagacc
gtggagaactcggcgtacacccgtacgctggctgccgacgtgaaggacgccgaaggcaac
gtgctggctaccgccggctcggatgtcggagacgtgctgatcgacgagctgtacgctgca
ggcgtggacgagatccgcgtccgctccgtgctgacctgcgactcggctgttggaacgtgc
gcgctgtgctacggccgttcgctggccagcggcaagaccgtggacatcggcgaggctgtg
ggcatcatcgccgcgcagtccatcggcgagcctggtacccagctgaccatgcgtaccttc
cacaccggtggtgtggcatcggctgacgacatcacccagggtctgcctcgtatccaggaa
ttgttcgaagcccgtacccctaagggtgtggctccgatgtccgaggtcgccggtcgcgtg
tcgatcgaagacgacgagaagcagctgcgtgttgtggtcaccccggacaacggcgacgag
aagcaggcctacccggttctgcgtcgagcccgcctactggttgaagagggcgaaagcatt
gctgccggtacccagctgaccagcggtaccctggatccgaagcaggttcttcgagtcctc
ggcccgcgtgaggcacagaagttcctggtccgcgaggtccaggatgtgtaccagtcgcag
ggtgtaggcatccacgataagcacgtggaagtcatcgtccgccagatgctgcgccgcgtc
accgtcatcgagtccggcgacaccgacctgcttccagccgagctggccgatcgttcgcgc
ttcaccgctgcgaaccgcaaggctgtctcggaaggcaagcgtcctgctgccggccgtgac
gagatgatgggcattaccaaggcctcgctggccaccgattcgtggctgtcggctgcttcc
ttccaggaaaccactcgcgtcctcacccaggccgcgatggaaggcaaggaagatccgctg
cgcggcctgaaggagaacgtgatcatcggtaagctgatcccggccggtaccggtctggac
cgctacacccaggtcaacgtcgagccaaccgatgaagcaaaggcaactttgttcaccggc
acctcggccttctcctccggcctgtacgacgatgcactggaaggcgggctgtcgcctgaa
ttccgtgccatctcgatggacgactacgaccacggctcggacttccgctaa
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