Glycomyces sp. TRM65418: K3N28_00965
Help
Entry
K3N28_00965 CDS
T07425
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gly
Glycomyces sp. TRM65418
Pathway
gly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3N28_00965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gly03019
]
K3N28_00965
03400 DNA repair and recombination proteins [BR:
gly03400
]
K3N28_00965
Enzymes [BR:
gly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3N28_00965
Messenger RNA biogenesis [BR:
gly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K3N28_00965
DNA repair and recombination proteins [BR:
gly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K3N28_00965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QZD55740
UniProt:
A0A8G1N2W7
LinkDB
All DBs
Position
226538..228670
Genome browser
AA seq
710 aa
AA seq
DB search
MAENAARPLRDEAETLLRALAGEHARLREDQWRAIEALCEGAAAPGSAHGSAGRRVLLVQ
RTGFGKSAVYFTATVLLRRRGAGPTVIVSPLLALMRNQIGAAERAGVRARTINSANPEDW
DAIAEAIAEDAVDVLLISPERLNNPAFRDHQLPKLAAGCGMLVVDEAHCISDWGHDFRPD
YRRIATFIAELPDSVPVLATTATANARVSDDIAEQLDRRDTSTLVLRGSLDRESLRLSVV
ELPDNAHRLAWLDEHLPRIEGSGIVYTLTVAAAEEVSDYLSGRGHAVASYTGRTDNTERL
QREEDLLGNRLKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQIGRAGRARDRAEV
VLLPGSEDRAIWEYFGSLSFPSEDAVRRTLDVLAAEGRALSTAALETRVDLRRTRLEMML
KVLDVDGAVRRVKGGWEATGEPWTYDAERYAKVAAARKHEQGRMLAYEATDQCRLEFLRR
ELDDPEAAPCGRCDNCTGARTEASVSAAAAEGAAAALSKPGVPFEPKRMWPTGMQAIGID
LKGKIPADRSAEPGRALARLSDIGWGGPLRELLADGVDREVPEDVFKAVVQVLASWDWAE
RPTAVVSMGSLSRPRLVDGLAERIARLGRMEYLGSLGRAAGAGSGAHRANSAQRLQQVLE
SFAVDFPVPASSVLLVDDVRDSGWSMTVAAMRLREAGAAAVYPLALALQA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaacgcggcccggccgctcagagacgaagccgaaacgctcctgcgcgccctc
gccggcgagcatgcgcggctccgagaggaccagtggcgcgccatcgaggcgctctgcgag
ggcgcggcggcgccggggagcgcccacggcagcgctggccgccgtgtgctcctggtgcag
cgcaccggtttcgggaagtccgcggtgtacttcaccgccacggtgctcctgcgccgccgc
ggcgccggccccacggtgatcgtctcgccgctgctcgcgctcatgcgcaaccagatcggg
gccgccgagcgcgcgggcgtgcgcgcccgcaccatcaactcggccaacccggaggactgg
gacgccatcgcggaggccatcgccgaggacgccgtcgacgtgctgctcatcagccccgag
cggctcaacaaccccgcgttccgcgaccaccagctccccaagctcgccgccggctgcggc
atgctcgtggtggacgaggcccactgcatctccgactggggccacgacttccggcccgac
taccggcgcatcgccaccttcatcgcggaattgcccgacagcgtcccggtcctggcgacc
accgcgaccgcgaacgcccgcgtctccgacgacatcgccgagcagctcgacaggcgggac
accagcacgctcgtgctccgaggcagcctcgaccgggaatccctgcggctgtccgtggtc
gagctgcccgacaacgcccaccggctcgcctggctggacgagcatctgccgcgcatcgaa
ggctcgggcatcgtctacacgctcaccgtggccgccgccgaggaggtgagcgactacctc
tccggacgcggccacgcggtcgcctcctacaccggccgcaccgacaacaccgagcgcctg
cagcgcgaggaggacctgctcggcaaccggctcaaggcgctcgtggcgaccagcgcgctc
ggcatgggcttcgacaagcccgacctcggattcgtcgtccacttgggagcgccgtcgtcg
ccggtggcgtactaccagcagatcggccgcgcgggccgggcccgcgaccgcgccgaggtg
gtgctgctgcccggcagcgaggaccgggcgatctgggagtacttcgggtcactgtcgttt
ccctcggaggacgcggtgcggcgcacgctcgacgtgctcgcggccgagggccgggcgctg
tcgacggcggcgctggagacgcgggtcgatctgcgccgcacccgtctggagatgatgctc
aaggtcctcgacgtggacggcgcggtacggcgcgtgaagggcggctgggaggccaccggg
gagccgtggacctacgacgccgagcggtacgcgaaggtggccgcggcccggaagcacgag
caggggcggatgctcgcctacgaggcgaccgaccagtgccgcctcgagttcctgcgccgg
gagctggacgaccccgaggccgcgccgtgcgggcggtgcgacaactgcaccggcgcccgc
accgaggcgagcgtgtcggcggccgcggccgagggggcggcggcggcgctgtcgaagccc
ggcgtgccgttcgagccgaagcgcatgtggcccacggggatgcaggcgatcgggatcgac
ctgaaggggaagatcccggccgatcggagcgcggagccgggccgggcgttggccaggttg
tcggacatcggctggggcggtccgctgcgcgagctcctggcggacggcgtcgaccgggag
gtccccgaggacgtcttcaaggcggtcgtgcaggtgctcgcgtcgtgggactgggcggag
cggccgacggcggtcgtctcgatggggtcgctgtcgcgtcctcgcctggtcgacggcctg
gcggagcggatcgcgcggttgggccgcatggagtacctgggttcgctggggcgggccgcg
ggtgcgggctcgggcgcgcaccgcgccaacagcgcgcagcggctgcaacaggtgctggag
tcgttcgctgtggacttcccggttccggcgtcgagcgtgctgctggtggacgacgtgcgc
gacagcggctggtcgatgaccgtggcggccatgcggttgcgcgaagcgggggctgcggcc
gtctacccgttggccctcgccttgcaggcctga
DBGET
integrated database retrieval system
