Glycomyces sp. TRM65418: K3N28_03925
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Entry
K3N28_03925 CDS
T07425
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gly
Glycomyces sp. TRM65418
Pathway
gly00040
Pentose and glucuronate interconversions
gly01100
Metabolic pathways
gly02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
K3N28_03925
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K3N28_03925
Enzymes [BR:
gly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
K3N28_03925
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-ProteinID:
QZD56283
UniProt:
A0A8G1N166
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Position
853233..854195
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AA seq
320 aa
AA seq
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MEQVFDSRHSRRRLFTAAGAVALGAAAAPFAGDLPAAHAQSGSPVGWATQNGGTTGGSGG
STTTVSSASAFASAVSGDARKIVRVSGAIQLSGMVRVGSNTTIIGNSGAVFTSGGLTLRT
VSNVIIQNMRFRGYSDDGINVEERSRNIWIDHNTFEAGNDGACDIKRESDFITVSWNRFD
GTDKTCLLGHSDGHTADRGKLRVSYHHNYFNGTTQRTPRVRFAEPVHVYNNYYANVRSYC
IATTMDAGVINEGNYFENCNRTVDIGQGSSGPGRIVSRNNHLVNSPAPTSRGSVSGVPYG
FQLDTPSQVKSIVTGGAGAR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggtcttcgacagccggcactcgcgccgccgtctcttcaccgccgcaggggcc
gtcgcactcggcgcggccgccgcgcccttcgccggggacctcccggccgcccacgcgcag
tcgggcagcccggtcgggtgggccacgcagaacggcggcaccaccggcggctccggcgga
agcacgacgaccgtctcgtcggcctcggccttcgcctccgccgtcagcggcgacgcgcgc
aagatcgtccgcgtcagcggcgccatccagctctcgggcatggtcagggtcggctcgaac
accacgatcatcggcaactcgggagccgtcttcaccagcggcggcctcaccctccgcacc
gtctccaacgtcatcatccagaacatgcgcttccgcggctactccgacgacggcatcaac
gtcgaggagcgctcgcggaacatctggatcgaccacaacacgttcgaggccggcaacgac
ggcgcctgcgacatcaaacgcgagtcggacttcatcaccgtctcctggaaccggttcgac
ggcaccgacaagacctgcctgctcggccacagcgacggccacaccgccgaccgcggcaag
ctgcgggtctcctaccaccacaactacttcaacggcaccacccagcgcaccccccgcgtg
cgcttcgccgagcccgtccacgtctacaacaactactacgccaacgtccgctcctactgc
atcgcgaccacgatggacgccggcgtcatcaacgagggcaactacttcgagaactgcaac
cggaccgtcgacatcgggcagggctcctcgggccccggccggatcgtgtcgcgcaacaac
cacctcgtcaactcccccgcccccacgagccgcggctcggtctcgggcgtgccctacggc
ttccagctggacacgccgtcgcaggtcaagtccatcgtgaccggcggcgccggcgctcgc
tga
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