Glycomyces sp. TRM65418: K3N28_09305
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Entry
K3N28_09305 CDS
T07425
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gly
Glycomyces sp. TRM65418
Pathway
gly03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K3N28_09305 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gly03400
]
K3N28_09305 (xth)
Enzymes [BR:
gly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
K3N28_09305 (xth)
DNA repair and recombination proteins [BR:
gly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
K3N28_09305 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
RTP1_C2
Motif
Other DBs
NCBI-ProteinID:
QZD57279
LinkDB
All DBs
Position
complement(2026613..2027392)
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AA seq
259 aa
AA seq
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MRVATWNINSLKARLERLLAWLASHEPDVVCLQELKCADADVPLDALAAAGYETASWGLG
RWNGVAILSRVGLSDVRRGIADQPAFNGETEPRAITATCGPLRVQSLYVPNGRDVDDPHF
AYKLAFLKALAADARADAAGDLPFAAMGDYNICPTDDDVWDADAWPGTTHVTQAERDALD
AVKAAGLADVHPRALKYDQPFTFWDYRNLDFPKNRGMRIDLALANPAFQAAVTDAFVDRN
ERKGKGASDHAPVVIDLDL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtggccacgtggaacatcaactcgctcaaagcacgcctcgagaggctcctggcc
tggctcgccagccacgagcccgacgtggtgtgcctccaagagctcaaatgcgccgacgcc
gacgtccccctcgacgcgctcgccgccgccggctacgagaccgcctcctgggggctgggc
cgctggaacggcgtcgcgatcctctcccgcgtgggcctgagcgacgtccgccgcggcatc
gccgaccagcccgcgttcaacggcgagaccgaaccgcgcgccatcaccgccacctgcggg
cccctgcgcgtccagagcctctacgtgcccaacggccgcgacgtcgacgacccgcacttc
gcgtacaagctggcgttcctcaaggcgctggccgccgacgcccgggccgacgcggccgga
gacctgccgttcgcggccatgggcgactacaacatctgccccaccgacgacgacgtctgg
gacgcggacgcctggcccggcaccacccacgtcacccaggccgaacgcgacgccctcgac
gcggtcaaagccgccggcctcgccgacgtccacccccgcgccctcaaatacgaccagccg
ttcacgttctgggactaccgcaacctcgacttccccaagaaccgcggcatgcgcatcgac
ctggctctggccaaccccgccttccaggcggcggtcaccgacgccttcgtcgaccgcaac
gaacgcaaaggcaaaggcgcctccgaccacgcccccgtcgtgatcgacctcgacctgtaa
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