Glycomyces sp. TRM65418: K3N28_13375
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Entry
K3N28_13375 CDS
T07425
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
gly
Glycomyces sp. TRM65418
Brite
KEGG Orthology (KO) [BR:
gly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gly03021
]
K3N28_13375
Transcription machinery [BR:
gly03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K3N28_13375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_AsnC-type
DUF7343
HTH_24
HTH_3
Sigma70_ECF
HNF-1_N
HTH_AraC
MarR
Motif
Other DBs
NCBI-ProteinID:
QZD53759
UniProt:
A0A8G1IZB0
LinkDB
All DBs
Position
complement(2930925..2931716)
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AA seq
263 aa
AA seq
DB search
MDKQALTRSNSDEYGHLAPLFEELQRLDSDDPRRTRLRDRLVTGYLPLAQHIAQRYSGKG
IAKDDLIQVASIGVIHAVDRFDPGRGADFLSFAVPTVMGEVRRHFRDTSWPMRVPRRLQE
LRASINQADAELSQHLDRPATGAEVADHLGITESEVHEGYKAARAYRAVSLDESPFSDDE
RTPLAETLGAEDVALELVDDHESLMPLLQELPERERTILGLRYFGDMSQTRIAQEVGLSQ
MHVSRLLNRTLTELREGLNSAAS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcaagcactgacccgctcgaattccgacgagtacggccatctcgcgccgctc
ttcgaagagctccagagactcgactccgacgacccgcgacgcacccggctccgggatcga
ctggtcaccggatacctgccgctggcccagcacatcgcccagcggtactcaggcaagggc
atcgccaaggacgacctgatccaagtcgcctcgatcggagtcatccacgcggtcgaccgg
ttcgaccccggtcggggcgccgacttcctgtccttcgccgtccccacggtcatgggagag
gtccgccgccactttcgcgacaccagttggccgatgcgcgtcccccgccggctccaagag
ctgcgggcgtcgatcaatcaggccgatgccgaactgtcccagcacctcgacaggcccgcc
accggcgccgaggtcgccgaccacctcggcatcaccgagagcgaagtgcacgagggctat
aaggccgcccgggcataccgagcggtgtcgctcgacgagtcgccgttctcggacgacgag
cggacgcccctggccgagactctcggagcagaagacgtcgccctcgaactggtcgacgac
cacgaatcactgatgccgctcctgcaagagctccctgagcgcgagcgcacgatcctcggg
ctgcgctacttcggcgacatgtcccaaacccggatagcccaggaggtcggcctctcgcag
atgcacgtctccagactgctcaaccgcacactcaccgagcttcgggagggcctgaacagc
gccgcctcctga
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