Glycomyces sp. TRM65418: K3N28_23100
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Entry
K3N28_23100 CDS
T07425
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gly
Glycomyces sp. TRM65418
Pathway
gly00040
Pentose and glucuronate interconversions
gly01100
Metabolic pathways
gly02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
K3N28_23100
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K3N28_23100
Enzymes [BR:
gly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
K3N28_23100
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QZD55555
UniProt:
A0A8G1J4J7
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Position
5082824..5084185
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AA seq
453 aa
AA seq
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MNQASAQSGGATGYAALNGGTTGGAGGQVVRATTGTQINAALCNRASASTPIIIQVEGTI
NHGNTSDVSGSSCDVGSTLIDLKNVSNVTIVGVGSGAVFDQIGIHIRSSSNIILQNFTVR
NVKKSGSPTSNGGDAIGMEAGVRNVWADHLTLEASGGESEGYDGLFDMKNDTKYVTLSYS
VLRNSERGGLIGSSESDTSNGFVTFHHNLYQNLNSRVPLLRGGIAHSYNNHFTGIVESGI
NSRAGARIQVDNNYFEDSKDVLGTFYTDERGAWEVNGNLFDNVTWSSPGSENYPAGPNVQ
STTSVAIPYSHRLDRAECVPSIVAATAGANRGLKTSDGDCSAQPPTPDPTDPDPTEPDPT
DPDPTDPDPTEPPGGANLSLASGAGADGSSKAGGTSYGNVRDGDMSTYWSPSGATGRISV
KWDSDVTVSSINIREAAGAGVLWAVWGRGAGFT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggcgtcggcgcagtcgggcggtgccaccggttacgcggcgttgaacgggggg
actaccggtggtgcgggcggtcaggtcgtccgggccacgaccggcacccagatcaacgcg
gccctgtgcaaccgggccagtgccagcaccccgatcatcatccaggtcgagggcaccatc
aaccacggcaacaccagcgacgtctccggctccagctgcgatgtcggctcgaccctgatc
gacctcaagaacgtcagcaacgtcacgatcgtgggggtggggagcggcgcggtcttcgac
cagatcggcatccacatccgctcctcgagcaacatcatcctgcagaacttcacggtcagg
aacgtcaagaagtccggctcgcccacctccaacggcggcgacgccatcggcatggaagcg
ggggtgcgcaacgtctgggccgaccacctcaccctggaggcctcgggcggggagtccgag
ggctacgacggcctgttcgacatgaagaacgacaccaagtacgtgaccctctcctacagc
gtcctgcgcaactccgagcgcgggggcctcatcggctccagcgagagcgacacctccaac
ggcttcgtcaccttccaccacaacctgtaccagaacctcaactcccgggtgccgctgctg
cgcggggggatcgctcacagctacaacaaccacttcaccggcatcgtggagtcgggcatc
aactcgcgggccggagcgaggatccaggtcgacaacaactacttcgaggactccaaggac
gtcctggggaccttctacaccgacgagcgcggcgcctgggaggtcaacggcaacctcttc
gacaacgtgacctggtcgagcccgggcagcgagaactaccccgcgggcccgaacgtgcag
tccaccaccagtgtcgccatcccctactcccaccgcctcgaccgggccgagtgcgtgccc
tccatcgtcgcggcgaccgccggggcgaaccggggcctgaagacctccgacggcgactgc
tccgcgcagccgcccacccccgaccccaccgaccccgaccccaccgagcccgacccgacc
gaccctgacccgaccgatcctgacccgaccgagcctcccggcggggccaacctcagcctc
gcctccggggccggggccgacggctccagcaaggccggcgggaccagctacggcaacgtc
cgcgacggcgacatgagcacctactggtcgcccagcggcgccaccggccgcatctccgtc
aaatgggactccgatgtcacggtgtcctcgatcaacatccgcgaggcggcgggcgccgga
gtcctgtgggcggtgtggggccgcggggcgggattcacctga
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