Glarea lozoyensis: GLAREA_00324
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Entry
GLAREA_00324 CDS
T04883
Name
(RefSeq) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
glz
Glarea lozoyensis
Pathway
glz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GLAREA_00324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_00324
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GLAREA_00324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
TACC_C
MG280
WXG100
COG4_N
DUF3450
Motif
Other DBs
NCBI-GeneID:
19459382
NCBI-ProteinID:
XP_008083273
UniProt:
S3CW55
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MSFNFNPTPSNGGAAPNNPFGTKTTSAPAFGAGQTSTAPPTTGLFGGTTPSSSGAGLFGS
TAAKPPSFGGGSTNIFGGGQTSSASSGAATTAPSLFGNKPATTSAAPSTSNLFSNLNTGT
PSSTGAASGGLFGSTGGAKPMFGGTTSSSAATSTPAPTKFGNFGLGNSTTPAGPPPAKTT
QAGPGLFGNAGTSGGPSLFGSKPAAPTSSAGGAAGGSSLFSGLNNNTATSAPAATTSTST
SNNKPAFSFPSAPSATGTQAPTTAASSAPQSLFNMGATSSATPASSAPAGGSLFSGLGGS
TAPASSSSNLFGSAAAKSTAPSTAAPATTTAAPTGLFPQSTTTSATPATSTPAPAFGGLS
TAKPSTTPATSTAATGGLGGTTSGAGASTAGGAPALGASTLGASTSGPTPQISRLKNKTM
DEIITRWASDLSKYQKDFQDQAKQVATWDRLLVDSAEKIQKLYHNTYEAERETAEVERQL
SNVESQQDELSGWLDKYEAEVDEMFSRQLGPGDQLQGPDQERERTYKLAEKLTDNLDDMG
KNLTSMIEAINDASSSLSKSSKTDDPLSHIVRVLNDHLTQLQWIDQNASVLQTKVAEAQR
VGLNIGSNGYGGLENDNIESFYRSTYGSRR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaacttcaaccccacccctagtaatgggggtgccgcacccaacaatccgttt
ggtaccaagacgacttctgcgccagcgtttggagcaggacaaacgtctacggctccacca
acgactggcctgtttggaggaacaacaccaagtagttcaggcgcaggattgtttggctcc
acggctgcgaagccaccaagctttggaggcgggtcgaccaacatctttggaggaggacag
acctcaagtgctagttctggagctgcgaccactgctccttcgttatttgggaacaagcca
gccacaacgtccgccgcaccatcgacaagcaatcttttctccaacttgaatactggcact
ccttcgtctactggggctgcatcgggggggctttttggaagcactggtggtgccaaacca
atgtttggcgggacaacatctagcagcgcagcgacaagtacaccggcccctacaaaattt
ggaaatttcggactagggaactcaactacacctgctggccctcctcccgcaaagactacc
caggccggacccggtttgttcgggaacgcaggaacatctgggggaccatcgttgttcgga
agcaagccagcagccccaacatcaagtgctggtggagcggcaggtggcagttcccttttc
tcgggattgaataataacactgctacatccgcgccagcagcgacaacgtctacttcaacc
tctaacaacaagcctgctttcagttttccttcagcgccaagtgcaacaggaacacaagct
cccacaacagcagcttcttctgcccctcaaagcctctttaacatgggagcaactagttcg
gccacacctgcatcgtctgccccagctggtggctcattattttccggacttggaggttct
actgcacctgcttcctcttcgtcaaaccttttcggttctgcggctgcgaaatctaccgct
ccaagtacagcagcaccagcaaccactaccgctgctccgacaggactattccctcaatct
acaacaacatcagctaccccagctacaagcactcctgcgccagcttttggtggactatct
actgctaagccttctacgactcctgcgacaagcactgctgctacaggaggtcttggaggg
acaacatctggagctggagcctcaacagccggcggagctccagcgctaggcgcatcgact
cttggagcatctacctctggcccaacaccgcaaatttcacgactgaagaacaagacgatg
gatgaaattatcacgagatgggcgtctgatctctcgaaatatcaaaaagacttccaggac
caagcaaagcaagttgcgacttgggataggttattagtcgacagcgccgagaagattcaa
aagctctatcacaacacgtacgaagcagagcgggaaaccgcagaagttgaacgacaactg
tcaaatgtggaaagccagcaggacgaactctcaggctggttggacaagtacgaggcagag
gttgatgagatgttcagccgtcagctaggtccaggtgatcaattacagggtcccgatcaa
gaacgagaacgaacttacaagctcgcggagaagctgactgataacttggacgatatgggc
aagaatctgactagtatgattgaagctatcaatgatgcctcttcctcgcttagtaagagc
agtaaaaccgacgatcctctttcacacatcgtacgagttctcaatgatcacctgacgcaa
ctgcaatggatcgaccaaaacgccagcgttcttcaaaccaaggtcgctgaagctcaacga
gttggtctgaacattggctcaaacggttacggtggtctagaaaatgacaatatagagtcc
ttctatcggtcgacttatggaagtagacggtag
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