Glarea lozoyensis: GLAREA_00356
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Entry
GLAREA_00356 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
glz
Glarea lozoyensis
Pathway
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_00356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
glz03041
]
GLAREA_00356
Enzymes [BR:
glz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GLAREA_00356
Spliceosome [BR:
glz03041
]
Complex C
Other components
Step II factors
GLAREA_00356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
WHD_HA2
AAA_19
AAA_22
SLFN-g3_helicase
nSTAND3
nSTAND_NTPase5
AAA_30
T2SSE
ATPase
SRP54
Flavi_DEAD
AAA_16
AAA_7
PhoH
ABC_tran
Cas3-like_C_2
NACHT
Motif
Other DBs
NCBI-GeneID:
19459414
NCBI-ProteinID:
XP_008083305
UniProt:
S3DB48
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MARDEGEQSPKRRKLDYNPLRNDDRFVVPARPSSAHNGSKSVVSRSQSRVGNGSRSSTPH
GRSRFASTPAPKQEEFDGPEPFVNEEDSNALDRDWYDGDEFGHTFGDDSHNPFGSYDNSW
ADQQREAALTEKKTGKRISARATQKQKDVDAWETNRMLTSGVAQRRDFGDDFEDDEEATR
VHLLVHDLKPPFLDGRTVFSKQLEPVPAVRDNQSDMAVFSRKGSKVVKERRQQKERQKQA
QEATNMAGTALGNLMGVKEDEGDSAAPVPGEEEQQSNSKFAQHMKKNDGASSFSQSKSLK
EQREYLPAFAVREDLLRVIRDNQVVIVVGETGSGKTTQLTQFLYEDGYAKLGMIGCTQPR
RVAAMSVAKRVSEEMECRLGSTVGYAIRFEDCTSKETAIKYMTDGVLLRESLNEQDLDKY
SCVIMDEAHERALNTDVLMGLFKKVLTRRRDLKLIVTSATMNSKKFSDFYGGAPEFFIPG
RTFPVDVMFHRSPVEDYVDQAVQQVLAIHVSMGAGDILVFMTGQEDIECTCELVQERLNA
LNDPPKLLILPIYSQMPADLQAKIFDKAAPGVRKVIVATNIAETSLTVDGIMYVVDAGYS
KLKVYNPRMGMDTLQITPISQANASQRAGRAGRTGPGKAFHLFTEAAFKDELYIQTIPEI
QRTNLSNTVLLLKSLGVKDLLDFDFMDPPPQDTITTSLFDLWALGALNNIGDLTAIGKKM
TAFPMDPSLAKLLITSEDYGCSEEMLTIVSMLSVPSVFYRPKERQDESDAAREKFFVPES
DHLTYLHVFSQWKSNGYSDGWCTRHFLHPKSLRRAKEIREQLLDIMKMQKMNLVSCGTDW
DVIRKCICSGYYHQAAKVKGIGEYNNLRTSVTVQLHPTSALYGLGYLPDYVVYHELILTS
KEYMSTVTAVDPHWLAELGGVFYSVKEKGYSARERRVTEVEFSRKMEIEEGMARDRRVEE
ERVGREEGRLVKKVEALEVKKKVRSAGAVKKAPARRAGRGF
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggcaagggatgagggagaacaaagtcctaaacgccggaagctggactacaatcccctg
cgaaacgatgaccggtttgtcgtcccagcccggccatcttcagcacataatggttcgaaa
tccgtggtatcaagatcgcaaagtcgagtaggaaatgggtcacgatcatcgacacctcat
ggacggtcgagattcgcctcgactccagcgcccaagcaggaggagttcgacgggccagag
ccattcgtaaacgaagaggattccaatgcgctggatagggattggtatgatggcgatgaa
tttggccacacctttggagacgattcccataacccatttggatcttacgacaactcctgg
gcagatcagcagcgagaagcagcgttgacggagaagaaaaccggcaagcgcataagtgct
agggcaacacaaaagcagaaagatgttgatgcatgggaaacaaatcgaatgcttacgtcc
ggagtagctcagcgacgggattttggagacgattttgaagatgatgaggaagccacgcgt
gttcacttactggttcacgatcttaagcccccatttctggacggccggacagtcttctct
aagcaattagaaccagtgcctgcggttcgggataaccagagcgatatggcagtgttcagt
cgaaaaggaagcaaagttgtaaaggagagacgccagcagaaggaaagacagaaacaagcc
caggaagctacaaatatggctggtactgcgttaggaaatttgatgggtgtcaaggaggat
gagggagacagtgccgctcctgtgcctggggaggaagagcagcaaagcaacagcaaattt
gctcaacatatgaagaaaaatgatggtgccagtagtttcagtcagagtaagtctttgaaa
gaacaacgagaataccttccagcattcgcagttcgagaagatctactgcgggtgatacgt
gacaaccaagtcgttattgtcgtgggtgagactggatctggtaaaacgacccagcttact
cagttcttatatgaagacggctacgcgaaacttggaatgattgggtgcactcaacccaga
agagtcgccgcgatgagcgttgcaaaacgtgtcagtgaagagatggagtgccggctcgga
agtactgtaggctatgctattcgatttgaggattgtaccagcaaggagacggccatcaaa
tatatgactgatggtgtccttcttagagaatcacttaacgagcaggatctggacaagtat
tcctgtgtgatcatggacgaagcccacgaaagagcacttaacacggatgtgcttatgggg
cttttcaagaaagttcttacccgtcggcgcgatcttaaacttattgttacatcagcaacc
atgaactcgaagaagttttccgatttctatggcggcgcgccggaattcttcattccggga
cgaacttttcctgttgatgttatgtttcacaggtcgccggtggaagattacgtggatcaa
gcagtacaacaagtactggctattcatgtctctatgggggcaggtgatattttagtcttc
atgactggacaggaagatattgaatgcacatgcgagctggttcaagaacgactgaacgct
ctcaacgacccaccgaaactccttatccttcccatttacagtcagatgccagcagatttg
caagccaaaatttttgacaaggctgctcctggagtcagaaaagttatcgttgcaacaaac
attgccgaaactagtttgactgttgacggtatcatgtatgtcgtcgacgccggttactcg
aagctcaaagtctataatcctcgaatgggaatggacaccttacaaataacacctatttcc
caagccaacgcctctcaaagagcaggcagagcaggccgtacaggtccaggaaaagcattc
catctcttcaccgaagccgctttcaaagacgagctctacattcagaccatccccgagatt
caacgtacaaacctcagcaacacagtcctcctcctgaaatccctcggcgtgaaggacctc
cttgatttcgacttcatggatccaccgcctcaagacaccataaccacctcactcttcgac
ctctgggccctcggcgccctcaataatatcggcgacctcacagccattggcaaaaagatg
accgccttccctatggacccatccctcgccaaactcctcatcacctccgaagactacggc
tgctcagaagagatgctcaccatcgtctccatgctctccgtccccagcgttttctaccgt
cccaaagaacgacaagacgaatccgacgccgcgcgcgaaaagttcttcgtcccagaatcc
gaccacctgacctacctgcacgtcttctcgcagtggaaaagcaacggctactcagacggc
tggtgcacccgccatttcctgcacccgaaatccctacgccgcgcaaaagagatccgcgaa
caattactcgacatcatgaaaatgcaaaagatgaatctggtatcctgtggtacagattgg
gacgtcatccgcaaatgcatctgctcaggctactaccatcaagccgccaaagtaaagggt
ataggcgaatacaacaacttgcgcacatccgtgacagtccaattgcatcccacatctgca
ctctacggtctaggctacctccccgactacgtcgtttaccacgaactcatcctcacgtcc
aaggaatacatgtccaccgtcacggcggtagatccgcactggcttgctgagctcggcggc
gtgttttactctgtgaaggagaaggggtattcggcaagggagaggagggttacggaggtg
gagttcagtcggaagatggagattgaggaggggatggcaagggatcgacgggtggaggag
gaaagggttggaagggaagagggcaggttggtgaagaaggttgaggcgctggaggtgaag
aagaaggttaggagtgcgggggctgtgaagaaggcgcctgctaggagggctggtaggggg
ttctag
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integrated database retrieval system
