Glarea lozoyensis: GLAREA_00379
Help
Entry
GLAREA_00379 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
glz
Glarea lozoyensis
Pathway
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_00379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
glz03041
]
GLAREA_00379
Enzymes [BR:
glz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GLAREA_00379
Spliceosome [BR:
glz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
GLAREA_00379
Complex C
U5 SnRNP specific factors
GLAREA_00379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
ResIII
BRR2_plug
Helicase_C
AAA_22
AAA_30
PhoH
Motif
Other DBs
NCBI-GeneID:
19459437
NCBI-ProteinID:
XP_008083328
UniProt:
S3CWB3
LinkDB
All DBs
Position
Unknown
AA seq
2223 aa
AA seq
DB search
MTDQQRDVSQYKYSAMSNLVLQADRRFVTRRNDEVTGDPESLAGRLSIRDMGSRNARDNA
PKQKKKALGLPDVERGGLQEGQDVLEREQRKRKRGEPAQLRGTGILSASDALVEGIVYRP
RTSATRATYDLILTTVANNLGDVSHEIVRSAADAVLEFLKDDDMKDFDKKKEIDDLLGAT
MTPKAFNELVNLGKKITDYDAQDEDEVMADGENRGEDGADIDDRQGVAVVFDDNSEDEDG
AEMINEIRDESSEDEEDREDRPGEEETATAGGAGKDRAEESDESEADAMILEAGPREKTD
TKDKKKNIVPARDIDAYWLQRQIGTIYSDAHIQQVKTQQALHILSGAPEEEGGEEKPLRE
IENDLAELFDYENHELVHKLITNRDKVVWLTRLARAEDAEDRGVVERKIASEGLRWILDE
LRGVISSGDGSKKRKLEIKMDIDVPSALTNGGAKKENTGDEGLVGGLQPGKLINLENLVF
DQGNHLMTNPKVKLPEGSTKRTFKGYEEIHVPPPKKRNDPSDRDIPVSEMPEWSRVPFSS
ATKLNKIQSACFPQAFQDDGNMLICAPTGSGKTNVGMLAILREIGKNRNPDTGDINLDAF
KIVYIAPLKALVQEQVGNFGARLKPYGITVSELTGDRQLTKQQIADTQIIVTTPEKWDVI
TRKATDLSYTNLVRLIIIDEIHLLHDDRGPVLESIVSRTIRKMEQTGDPVRLVGLSATLP
NYRDVASFLRVDPLKGMFHFDGSFRPCPLRQEFVGITEKKAIKQLKTMNDVTYTKVLEHV
GKNNHQMLIFVHSRKETSKTARYIRDKALEMETIGQILRSDAGSREALNSEAEAVNDREL
KDLLPYGIGIHHAGMSRPDRTSVEDLFNDGMIQVLVCTATLAWGVNLPAHTVIIKGTQVY
SPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIITTQSEMQYYLSLLNQQLPIESQFV
SKLVDNLNAEVVLGNVRSRDEGVEWLGYTYLFVRMLRSPGLYSVGADYEGDSALEQKRVD
LIHSAAVVLEKSNLIKYDKKTGKLQSTELGRIASHYYITHSSMLTYNHHIQPSITPIELF
RVFALSDEFKYIPVRQDEKLELAKLLGRVPIPVKEGIEEPHAKINVLLQAYISRLKLEGL
ALMADLVYVTQSAGRILRAIFEITLKKGWSSVAKTALELCKMAEKRMWPTMTPLRQFQSC
PRDIVQKAERIDVPWANYFDLDPPRMGELLGLPKAGKTVCNLVSKFPRLDVQAQVQPMTR
SMLRVELTITPRFEWDEDIHGSAESFWIIAEDCDGEDILFHDQFILRKDFAQSEENQHVV
EFTVPITEPMPPNYFVSVISDRWMHSETKLAVSFQKLILPEKFPPHTPLLDLQPLPVAAL
KSNDFKSLYPNWERFNKIQTQAFNSLFSTDDNVFIGAPTGSGKTVCAEFALLRHWNKQTA
GRVVYIAPFQELVDARLVDWQLRFAELRGGKEIVKLTGETTADLKLLERGDLVLATPSQW
DVLSRQWQRRKNIQNVELFIADELHMLGGHSGFVYEIIVSRMNYIRSQTELPLRIIGLSV
SLANARDIGEWIDAKKHNIYNFSPHVRSVPLELHVQSFTIPHFPSLMLAMAKPTYLSILQ
MSADKPALVFVPSRKQARATTRDLLAACVASDDEDRFLHADVDQMRPLLERIGEEALAEA
VSHGVGYYHEALSASDKRIVKHLYNNGAIQVLVASRDVCWELDCVAHLVVVMGTQYYEGR
EHRYVDYPLSEVLQMFGKASRPLEDKLGRGVLMVPAVKREYYKKFLNEALPIESHLQAYL
HDAFVSEISTKMIESADDAINWTTFTYFYRRLLANPSYYSLLDVSHEGLSAHLSELVETT
LKELAEFKIIDLDEEDDSVTPLNAAMIAAYYNISYVTMQTFLLSLSGKTKLKGILEIITS
ATEFESIQIRRHEDNLLRRVYDRVPVKMGQPSYDSPHFKAFVLLQAHFSRMQLPIDLAKD
QEIILTKVISLLSATVDILSSDGHINAMNAMEMSQMVVQGMWDRDSPLKQIPHFTPEVIA
AANKSGVKDIFEFMEAMDPSENPDYEALVKRLSLSQTQLAQAAAFTNNKYPNIELDFQVE
DPENITAGDPAYLKVKIAREVDEDDEAGDVDMTVHAPFYPQKKMENWWLVVGEESSKTLL
AIKRITIGKSLNVRLEYTVPTPGKHELKLYLMSDSYVGVDQDPEFTVDVAEGMDEDDDEE
DEE
NT seq
6672 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccaacagcgcgatgtttctcagtacaaatactcggcgatgtccaacctggtt
ctccaggcggaccgtcggtttgttactcggcgcaacgatgaagtaactggggacccagaa
tcacttgctggtaggctaagcatccgggatatgggatcgagaaatgcgcgcgacaatgcg
ccaaagcagaagaaaaaggctttgggattacctgatgtagagaggggcggtttacaggaa
ggtcaagatgtgttggaacgagaacaacgcaaacgaaagcgtggggaacctgcgcaacta
cggggaactggtatcctgtcggcatctgacgcgctggttgaaggtatcgtgtatcggcca
cgaacatctgccactcgagcaacttacgatcttatcctcactaccgtcgccaacaatcta
ggtgatgtttcgcacgaaatcgttcgaagtgctgcggatgctgtcttggagtttctcaag
gacgatgacatgaaagatttcgataaaaagaaagaaatagatgatttactaggcgccacc
atgacccccaaggcatttaatgagctagtaaatttgggaaagaagataaccgattacgac
gcacaagatgaagacgaggtcatggcagatggggaaaatcgcggtgaagatggggcagac
attgatgaccgccaaggtgtcgctgttgtctttgacgacaattctgaagatgaagatggg
gcagaaatgataaatgaaatacgcgatgagtcgtctgaagatgaagaagatcgtgaagac
cgtcctggggaagaagagactgcaacagcgggcggtgctggcaaagacagggcggaagag
agtgatgaatcggaggcagacgcgatgattctagaagctgggcctcgtgagaaaacagac
accaaagacaagaagaagaatattgttccagcaagagatattgacgcttactggttacaa
aggcaaattggcacaatttattcggatgcacatattcaacaagtcaagacacagcaagcc
cttcacatattatctggtgctccggaggaggaaggcggtgaagagaagccgttacgagaa
atcgaaaacgacctcgccgagctttttgattacgaaaatcacgagctcgttcacaaactc
atcaccaacagagacaaagtagtatggctgacccgtttagcgcgagctgaggatgcggag
gataggggcgtggtcgagagaaagatagcttcggaaggcctaagatggatccttgatgag
ctacgaggagtcatctccagtggagatggatccaagaagcgcaagctagagatcaaaatg
gacatagatgttcccagcgcactgacgaatggtggcgccaagaaagaaaatacaggtgat
gaaggacttgttggaggtttgcaaccaggaaagcttattaacctggaaaatcttgtgttt
gatcaaggcaatcacttaatgacgaatcccaaggtcaagctccccgaaggttcaaccaag
cgtacctttaagggctatgaggagatacatgtgccacccccaaagaagcgcaacgacccg
agtgatcgcgatattcccgtctcagagatgccagagtggtcgcgagtaccatttagctcg
gcaacaaagctaaacaagattcaatccgcctgtttccctcaagctttccaagacgacggc
aacatgctgatatgtgcgcccactggaagtggaaagacgaatgttggaatgttggctatt
cttcgtgagattggcaagaaccggaatccagacactggtgacataaatctagacgcattc
aagattgtctatatcgcacctttaaaagctttagttcaggagcaggtcggcaacttcggt
gcccggctgaaaccgtatggcattactgtttctgagctgactggcgaccgacagctcaca
aaacagcaaattgctgatacccagattattgtcacaacgcccgagaagtgggatgtcatt
acgagaaaggcaacggatctaagctataccaatcttgtacgactaatcatcattgatgag
attcatctgttgcacgacgaccgtggccctgtactggagagtattgtcagtcgaacgatt
agaaaaatggaacagaccggcgatcctgtccgtctagtcggtctgtctgccacactgccc
aactatcgcgatgttgcaagctttttgcgcgttgatcctctgaaaggtatgtttcatttt
gatggatctttccgtccctgtccgcttcgccaagaattcgttgggatcacggagaagaag
gcgatcaagcaactcaaaacaatgaacgatgtaacctacacgaaagtcctcgagcatgta
gggaagaacaaccaccagatgctcatttttgtacactcccgcaaggagacgtcaaaaact
gccagatacattcgagacaaagcgttggaaatggagactattggccaaatcttgagaagc
gatgctggtagcagagaagcactgaattccgaagcggaagctgtgaatgacagagagctg
aaagacctgctgccctacggtatcggcatccatcatgcaggcatgagtcggccagatcgt
acttccgttgaagatctatttaatgatggaatgatacaagtcctcgtatgcacggctaca
cttgcttggggcgtcaatctgcctgcccataccgtcataatcaagggtacacaagtctac
tcccctgagaagggcagctgggttgagctgagcccgcaagacgttcttcagatgctgggt
cgagcgggtagaccgcagtacgacacttatggcgaaggcatcatcatcactacccaaagt
gagatgcagtattacctgtcccttctcaatcaacaactgccaatagagagtcaatttgtc
agtaaattggtcgacaacttgaatgccgaagtcgtccttggaaatgtccgaagtcgcgac
gaaggggttgagtggttaggctacacctatctgtttgtccgcatgctgcgttcacctggc
ctgtacagtgttggtgcagattatgaaggagatagtgccctagaacagaagcgtgtagac
ctcatccactcagctgctgtcgttctcgagaagtcaaacctcatcaagtacgacaaaaag
actggtaaactacaatccacagagctcggccgcatcgcttcgcactactatattacacat
agctcaatgttgacctacaaccaccacattcagccttcaatcactcccattgagcttttc
cgcgtatttgctttgagcgacgagttcaaatacattcccgttcgtcaagacgagaagctc
gagctcgctaaattactgggacgcgttcccattcctgtgaaggaaggcatagaggagcct
catgcgaagatcaacgtgcttttgcaagcatacatttctcgcctcaagcttgagggcctt
gcactgatggcagatcttgtttacgtcactcaatccgcaggcagaattctcagagcaatt
ttcgagatcactctcaaaaaaggctggtcttccgttgcgaagacggcattggagctctgt
aaaatggcggaaaagcgtatgtggcccacaatgacccctctgagacaattccagagctgt
ccgcgagacatcgtgcagaaagctgagcggattgatgtaccatgggcgaattatttcgat
ttagaccctccccgtatgggcgagctcctcggactccctaaggctggcaagactgtgtgt
aatcttgtgtctaaatttccacgattagacgtgcaggctcaggttcaacctatgaccaga
tcaatgctgagggtggagttaacaatcacgcctaggttcgaatgggatgaagatattcat
ggctcggccgaaagcttctggatcattgcggaagactgtgacggagaagacattcttttc
catgaccaattcattctccgtaaagactttgcccagtctgaagaaaaccagcatgtcgtg
gagttcacggtgccgataacagaacctatgcctcccaactacttcgtttctgtcatctcc
gatagatggatgcactcagaaaccaaactagccgtctcatttcagaaactgattttaccg
gagaagttccccccgcatacgcctctacttgacttgcaaccattaccggttgcggcgttg
aaaagcaacgacttcaaatctttgtaccctaattgggagcgatttaacaagattcaaact
caggctttcaactccttattttcaactgacgacaacgtctttataggggctccaacaggc
agcggcaagactgtatgtgccgaatttgcactcctccgccactggaacaaacaaaccgct
ggccgtgtagtctatattgctccgtttcaggagcttgttgacgccaggctggtagattgg
caacttcgcttcgctgaacttcgtggaggtaaagagatcgtgaagctaactggcgaaacc
actgcagacctcaagctacttgaacgaggtgatcttgtccttgctacgccttcgcagtgg
gacgtcttgtctcgccaatggcaacgacgaaagaacatacaaaatgttgaactcttcatc
gcggacgagctccatatgcttggcggacactcaggctttgtgtatgagatcattgtgtcg
cgcatgaactatatccgatcgcagactgaacttcctcttcgaatcattggtctaagtgta
tctctcgccaatgcccgcgacattggtgagtggattgacgctaaaaagcataacatctac
aacttcagtccccatgttcgatctgttcctctggagctacacgtccaatcattcaccatc
ccgcacttcccatcgttgatgctcgctatggcgaagccgacttatctctccatactgcaa
atgtcagcagacaaacccgcccttgtctttgtccccagtaggaagcaggctagggccact
actagggacttactagctgcttgtgtcgctagtgacgacgaagaccgcttcctgcacgca
gacgttgatcaaatgagacctttattggagcgtatcggagaggaggcgctggcggaagca
gtctcgcatggcgttggatattaccacgaggctttgagcgcaagtgacaagcgaatagtt
aagcatctatacaataacggtgctattcaggtgttggttgcctctcgcgatgtatgctgg
gagttggattgcgttgcccacctggtcgtcgttatgggcactcagtactatgaaggccga
gaacatcgatatgtggactatccattgagtgaggttttgcagatgtttgggaaggcatct
cgcccgctcgaggataagttgggccgtggcgtgctgatggtgccggctgtgaagcgcgag
tactacaagaagttcctaaatgaggcacttcctattgagagtcaccttcaagcgtatctg
catgatgcgttcgtgtccgaaatcagcactaaaatgatcgaatctgctgatgatgcgatc
aactggaccacattcacatacttctatcgtcgtcttctagcaaatcctagttactacagt
ttgctggatgtgtcacatgaaggtctaagcgcacatctttcagagctggtagaaacaacc
ttgaaagaattggcagagttcaaaatcatcgatttagatgaggaagacgattccgttaca
ccactcaacgcagccatgattgcggcctactacaatatctcatatgtcactatgcaaacc
tttctgctgtcgctaagtgggaagactaaactgaaaggaatattggagataatcacctca
gccacggagtttgaatccattcagatccgtaggcatgaagataatcttttgcgacgggta
tatgatcgagtgccagtcaaaatgggacagccaagttatgattcaccgcatttcaaggcc
ttcgttcttctccaagctcacttctcgcgaatgcagctaccaattgatttggctaaagac
caagaaatcatcttgacgaaagttatcagcttgctaagtgccactgtagatattttgtcg
tcagatggccacataaacgccatgaacgccatggagatgtcgcagatggttgtgcagggc
atgtgggatcgcgatagtccgttgaagcagattccccatttcacaccagaagtaattgct
gctgcaaacaaatctggtgtcaaagatatctttgagttcatggaggctatggatccctct
gaaaacccggattacgaagctcttgtaaagcgtttgagcctttctcaaacccagttggcg
caagctgcagccttcaccaacaacaaatatccgaatattgaactggatttccaagttgag
gatccagaaaatatcacggctggagatcctgcttacttgaaggtcaaaattgcgcgcgag
gtagacgaagacgatgaggctggggatgttgatatgacagtgcatgcgccattctatccc
caaaagaagatggaaaactggtggctggtagtcggcgaagaaagctccaagaccctcctt
gcaataaaacgcataacaattggaaagtctctgaacgtgagactggagtacacggtcccc
acgcccggaaaacatgagctgaagctgtacttgatgagtgacagctacgtgggcgtcgat
caggatccggaatttacagtggacgtcgcagagggcatggacgaggacgatgatgaggaa
gacgaagagtag
DBGET
integrated database retrieval system
