Glarea lozoyensis: GLAREA_00445
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Entry
GLAREA_00445 CDS
T04883
Name
(RefSeq) Sm-like ribonucleoprotein
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
glz
Glarea lozoyensis
Pathway
glz03018
RNA degradation
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_00445
09123 Folding, sorting and degradation
03018 RNA degradation
GLAREA_00445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_00445
03041 Spliceosome [BR:
glz03041
]
GLAREA_00445
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GLAREA_00445
mRNA degradation factors
5'-3' decay
Lsm complex
GLAREA_00445
Spliceosome [BR:
glz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
GLAREA_00445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM14
SM-ATX
Hfq
Motif
Other DBs
NCBI-GeneID:
19459503
NCBI-ProteinID:
XP_008083394
UniProt:
S3CUJ8
LinkDB
All DBs
Position
Unknown
AA seq
82 aa
AA seq
DB search
MENGTATQGEGRDPSGFLSEIIGSQVTVKLNSGVVYKGELQSVDGYMNIALEKTEEHVNG
VKKRSYGDAFVRGNNVMYISAD
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggaacagcaacacagggtgaaggcagagacccctctggtttcttgagcgaa
atcatcggaagccaagtgaccgtgaagctcaacagtggtgtcgtatacaagggagagctt
caatcggtagatggttatatgaacattgcgctcgagaagactgaggagcatgtgaatggt
gtcaagaagagaagttatggtgacgctttcgttcggggaaacaatgttatgtatatctca
gcggattaa
DBGET
integrated database retrieval system