KEGG   Glarea lozoyensis: GLAREA_00563
Entry
GLAREA_00563      CDS       T04883                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
glz  Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:glz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:glz03009]
    GLAREA_00563
   04121 Ubiquitin system [BR:glz04121]
    GLAREA_00563
Ribosome biogenesis [BR:glz03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    GLAREA_00563
Ubiquitin system [BR:glz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     GLAREA_00563
SSDB
Motif
Pfam: WD40 Sof1 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd EIF3I WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th MIOS_WD40 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 NBCH_WD40 WD_LRWD1
Other DBs
NCBI-GeneID: 19459621
NCBI-ProteinID: XP_008083512
UniProt: S3DSK3
LinkDB
Position
Unknown
AA seq 445 aa
MKIKALSRPVASAQAPGSDVARQPRNLDPALHPFERAREYTRALNATKIERMFAAPFIAQ
LGKGHVDGVYTLAKDPNSLQRFASGSGDGIVKVWDLTTREEIWNTSAHENIVKGMCWTRD
KRLLTCASDRSIKLWEPYNSTAGAPPTATWLGENAFTSLSHHRSKNAFAASSGVISIYDL
EKSSAPPDVIKWPNATDTITSVSFNQTETSILASTATDRSIVLYDLRTSMPLAKTVLNFA
SNSISWNPMEAFNFAVANEDHNIYIFDMRKMNRALNVLKDHVAAVMDVEFSPTGEELVSA
SYDRTVRLWSRMKGHSRDIYHTKRMQRVFSAKWTPDNKYILSGSDDGNIRLWRAQASKRE
GIKSAKQRQSLEYNEALSERYAHMPEIRRIKRHRHIPKVVKKAGEIKNEELKAIKRKEEN
ERKHTKAQFKKRRNEREKMVLAAEK
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgaaaatcaaagctctcagtcggccggtcgcatctgcgcaagctcccgggtctgatgtc
gcaagacaaccccgcaacctcgatccagcgcttcatcctttcgaaagagcgagagaatat
actagagcactcaatgccacgaaaattgagcgcatgtttgctgcgccgtttatagcgcag
cttggaaagggtcatgtcgacggagtttatactttagcgaaagatccaaattctttacag
agatttgccagtggaagtggtgatggaattgtgaaagtctgggatttgactactcgagag
gagatatggaataccagcgcacacgaaaacattgtgaaggggatgtgttggacaagagac
aagaggcttttaacatgtgcgagcgatcgctcaattaagctatgggaaccatacaactcg
accgctggcgcgccaccgactgctacatggctaggagaaaacgctttcacaagcttgtcg
catcatcgatcgaagaacgcttttgcagcatcatccggagttatttcaatatacgacttg
gagaagagctcggcacccccagatgttataaaatggcccaatgctacagatacgatcact
tctgtctctttcaatcagactgaaacttctatattggcttcgactgcgacagacagatca
attgtgctttatgatttacgaacatccatgcctttggccaagactgtattaaattttgct
tcgaactcgatctcttggaatccaatggaggccttcaattttgctgtggccaatgaagac
cacaacatttatattttcgatatgagaaagatgaatagagcgttgaacgtattaaaagac
catgttgcagcggttatggatgtagaattcagtcccaccggagaagaacttgtcagtgca
tcgtatgaccgtactgtaagactgtggagccgaatgaaagggcactcgcgggatatctat
cacacgaagcgaatgcagagggtcttctccgccaaatggacaccagataacaagtacatt
ctttccggatcagacgatggaaacattcgattatggagagctcaagcttcgaaaagagag
ggcatcaagtcagccaagcagcgacaatccctagagtacaatgaagcgctgtcggaacga
tacgctcatatgcctgaaatcaggcggatcaagcgacaccgacatattccaaaggtggtc
aagaaggccggcgaaattaagaatgaagaactcaaggcgattaagagaaaggaagagaac
gaaaggaaacataccaaggcccaattcaagaagcgaaggaatgagagggagaagatggtt
ttggcggctgaaaaatag

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