Glarea lozoyensis: GLAREA_00563
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Entry
GLAREA_00563 CDS
T04883
Name
(RefSeq) WD40 repeat-like protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
glz
Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
glz03009
]
GLAREA_00563
04121 Ubiquitin system [BR:
glz04121
]
GLAREA_00563
Ribosome biogenesis [BR:
glz03009
]
Eukaryotic type
90S particles
Other 90S particles
GLAREA_00563
Ubiquitin system [BR:
glz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
GLAREA_00563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
MIOS_WD40
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
NBCH_WD40
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
19459621
NCBI-ProteinID:
XP_008083512
UniProt:
S3DSK3
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKIKALSRPVASAQAPGSDVARQPRNLDPALHPFERAREYTRALNATKIERMFAAPFIAQ
LGKGHVDGVYTLAKDPNSLQRFASGSGDGIVKVWDLTTREEIWNTSAHENIVKGMCWTRD
KRLLTCASDRSIKLWEPYNSTAGAPPTATWLGENAFTSLSHHRSKNAFAASSGVISIYDL
EKSSAPPDVIKWPNATDTITSVSFNQTETSILASTATDRSIVLYDLRTSMPLAKTVLNFA
SNSISWNPMEAFNFAVANEDHNIYIFDMRKMNRALNVLKDHVAAVMDVEFSPTGEELVSA
SYDRTVRLWSRMKGHSRDIYHTKRMQRVFSAKWTPDNKYILSGSDDGNIRLWRAQASKRE
GIKSAKQRQSLEYNEALSERYAHMPEIRRIKRHRHIPKVVKKAGEIKNEELKAIKRKEEN
ERKHTKAQFKKRRNEREKMVLAAEK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaaagctctcagtcggccggtcgcatctgcgcaagctcccgggtctgatgtc
gcaagacaaccccgcaacctcgatccagcgcttcatcctttcgaaagagcgagagaatat
actagagcactcaatgccacgaaaattgagcgcatgtttgctgcgccgtttatagcgcag
cttggaaagggtcatgtcgacggagtttatactttagcgaaagatccaaattctttacag
agatttgccagtggaagtggtgatggaattgtgaaagtctgggatttgactactcgagag
gagatatggaataccagcgcacacgaaaacattgtgaaggggatgtgttggacaagagac
aagaggcttttaacatgtgcgagcgatcgctcaattaagctatgggaaccatacaactcg
accgctggcgcgccaccgactgctacatggctaggagaaaacgctttcacaagcttgtcg
catcatcgatcgaagaacgcttttgcagcatcatccggagttatttcaatatacgacttg
gagaagagctcggcacccccagatgttataaaatggcccaatgctacagatacgatcact
tctgtctctttcaatcagactgaaacttctatattggcttcgactgcgacagacagatca
attgtgctttatgatttacgaacatccatgcctttggccaagactgtattaaattttgct
tcgaactcgatctcttggaatccaatggaggccttcaattttgctgtggccaatgaagac
cacaacatttatattttcgatatgagaaagatgaatagagcgttgaacgtattaaaagac
catgttgcagcggttatggatgtagaattcagtcccaccggagaagaacttgtcagtgca
tcgtatgaccgtactgtaagactgtggagccgaatgaaagggcactcgcgggatatctat
cacacgaagcgaatgcagagggtcttctccgccaaatggacaccagataacaagtacatt
ctttccggatcagacgatggaaacattcgattatggagagctcaagcttcgaaaagagag
ggcatcaagtcagccaagcagcgacaatccctagagtacaatgaagcgctgtcggaacga
tacgctcatatgcctgaaatcaggcggatcaagcgacaccgacatattccaaaggtggtc
aagaaggccggcgaaattaagaatgaagaactcaaggcgattaagagaaaggaagagaac
gaaaggaaacataccaaggcccaattcaagaagcgaaggaatgagagggagaagatggtt
ttggcggctgaaaaatag
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