Glarea lozoyensis: GLAREA_00626
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Entry
GLAREA_00626 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
glz
Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
glz03041
]
GLAREA_00626
Enzymes [BR:
glz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GLAREA_00626
Spliceosome [BR:
glz03041
]
Complex C
Other components
Complex C specific factors
GLAREA_00626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
AAA_19
cobW
AAA_30
Cas3-like_C_2
T2SSE
AAA_23
Motif
Other DBs
NCBI-GeneID:
19459684
NCBI-ProteinID:
XP_008083575
UniProt:
S3DBW1
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MADFDLAATFIPSLHKPASLLPIARHKKSLLYTIETYPVTIVVGQTGSGKTTQIPQYLEQ
AGWCADGKIIAVTQPRRVAATTVAIRVAEEMGCKIGAEVGYSIRFEDVTSSSTRIKFLTD
GLLLREALVDPLLSRYSVIMVDEAHERSLSTDVLLGVLKKILKRRSNDLRIIISSATLQA
EEFLKFFAGDEDTQPRQESAVTLDDLISQGANKSTSTGHSTGQIVNLEGRTYPVDILYLE
APSEDYVEKAVQTVFEIHTKESDGDILVFLTGREEIDNAVQGISERAASLHPRAQALMPL
PLYAGLSTEQQMYVFEEAPENTRKVIFSTNIAEASITIDGIVYVVDTGFVKLRAFNPLTG
IETLTATPVSKASATQRAGRAGRTRPGKCFRLYTESNFERLLESTVPEIQRSNLAPVILQ
LKALGIDNIVRFPFLTSPPSELVIRALELLYSLGALDTYAKLTRPLGTRMAELAVEPMMA
KTLLSAATFGCLSEILTIAAMTSLGGSVWVPHDGEKKKMESARRKFAVEEGDHITLLNVY
QAFITKGKKEARFCHDNYLNFKSLTRAVSIRGQLKRYLERFGITVPETLSSNPNLQPLSV
GGPDKGEQIRRCLTTGYFAHAAKMQPDGTFRNVAGGTVLHAHPTSLMFNRKAEWVIFHEV
METGSKTFIRDVSKIEKGWLVEYAPEFYKIQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggattttgatcttgctgccactttcattccttcattgcacaagccagcttctcta
ctacctatcgctcgtcacaaaaaaagcctcctgtacaccatcgagacttacccagtgact
attgtcgtcggacaaacaggttcgggaaagacaactcagataccccaatacctcgagcag
gcaggatggtgtgcagacggcaagatcattgctgttactcagccacgtcgagttgccgca
acaacggtcgccatcagggtagctgaagagatgggatgtaagatcggtgccgaggtgggc
tattcgattaggtttgaggatgtgacttcttcttcgactcgtattaaattcttgaccgat
ggcttgttacttcgtgaagcattggtagacccactactctcacgttactcggtcatcatg
gtcgacgaagcacatgagcgatctcttagcacagatgtacttcttggagtcttgaagaaa
atcctaaaaagacggtcaaatgaccttcgtatcatcatcagtagtgccactctgcaggct
gaagagttcctgaaattcttcgctggtgatgaggatacccagcctcgacaggaaagtgcc
gttactctagatgatctgatctcccaaggggcaaataaatctacgagcactggccattcc
actggccagattgtcaacttagaagggagaacatacccagtcgacatcctctatctagag
gcgccctcagaggattatgttgagaaagctgtccaaaccgtgtttgaaatccatacaaaa
gagtcagatggtgatattctggtatttttgactggtcgagaagagattgataacgcggta
caaggaatctccgaacgagctgcaagtttgcatcctcgagcacaagcattaatgccttta
ccattatatgctgggctgtccacggagcaacaaatgtatgtctttgaagaagcgcctgag
aatacaagaaaggtcatattctcgacgaatatcgccgaagcatcaataactatcgatgga
atcgtctatgttgttgacaccggtttcgtcaaattgagagccttcaatcctttgaccggt
attgagacattgactgcaaccccagtctcaaaagcttccgcaacccagagagcaggccgc
gcagggcgaacgaggccagggaaatgcttcagactatatacagagtcaaactttgaacga
cttttagaatcaactgtccccgagattcagcgctctaatctcgcgccagtgatcctccag
ctcaaagctcttggtatagataatattgtccgctttccgtttctcacctctccaccttca
gagctagtcattcgtgcactggaacttctttattcccttggcgcactggacacctatgct
aaactcaccagaccgttggggacacgtatggcagaattggctgtcgagccaatgatggca
aaaacactcctgtcggctgcaacctttggttgtctttctgagatcctcactatagcagca
atgacatctctcggtggtagtgtctgggttcctcatgacggcgagaaaaagaagatggaa
tccgcacgacgcaaattcgccgttgaagagggtgaccatattactcttttaaatgtctat
caagctttcataacaaaagggaagaaggaagctcgtttctgtcatgacaattatctaaac
ttcaaatctctcacccgcgctgtatcaattcgtggtcagttaaaacgctacctcgaacgc
ttcggtataacggttccagaaacactctcatcgaacccaaatctccagccgctttcggtt
gggggtcctgacaaaggcgaacaaatccggcgatgtctcaccacaggttatttcgcacac
gcggccaagatgcaaccagatggcactttcagaaacgtagccggaggaacagtattgcat
gcccaccccacatctctgatgtttaatcgaaaggctgagtgggtgatcttccacgaggtt
atggagacgggcagtaagactttcattagagatgtcagtaagattgaaaaaggctggctg
gttgagtatgctcctgaattttacaaaattcagtga
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