Glarea lozoyensis: GLAREA_01443
Help
Entry
GLAREA_01443 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
glz
Glarea lozoyensis
Pathway
glz03013
Nucleocytoplasmic transport
glz03015
mRNA surveillance pathway
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_01443
09122 Translation
03013 Nucleocytoplasmic transport
GLAREA_01443
03015 mRNA surveillance pathway
GLAREA_01443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_01443
03041 Spliceosome [BR:
glz03041
]
GLAREA_01443
Enzymes [BR:
glz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLAREA_01443
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
GLAREA_01443
Spliceosome [BR:
glz03041
]
Complex C
Other components
EJC/TREX
GLAREA_01443
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
GLAREA_01443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF4844
Motif
Other DBs
NCBI-GeneID:
19460501
NCBI-ProteinID:
XP_008086850
UniProt:
S3D0E7
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MSAEEDLIDYSDEELQTTDAAAGADANGGKKGDLAVTEDNADKKGSYVGIHATGFRDFLL
KPELLRAITDCGFEHPSEVQQNAIPQAMLGTDVLCQAKSGLGKTAVFVLTTLQQVDPVAG
ETSVLVMCHTRELAYQIKNEYARFSKYMPDVKTGVFYGGTPILKDAEILKNKETHPHIIV
ATPGRLNALVRDKYLRLGSCKVFVLDECDKMLEQIDMRRDVQEIFRATPTQKQVMMFSAT
LSQEVRPICKKFMQNPMEIYVDDDTKLTLHGLAQYYIKLDEKEKNRKLNELLDELHFNQV
IIFVKSTLRATELDKLLRECNFPSIAVHSGVGQEERIKRYKEFKEFNKRICVATDVFGRG
IDIERINVAINYDLPGDADSYLHRVGRAGRFGTKGISISFVSNEADQEVLKEIEKRFEAS
VPEYPEGGIDSNTYMAN
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgaagaagatctcatcgattactccgacgaggagctacaaaccacagatgct
gcagctggcgcagacgccaacggaggaaaaaagggcgacttagctgtgaccgaggacaac
gccgataagaaaggcagttatgttggtattcacgccaccggattccgcgatttcctattg
aagccggagcttcttcgtgccatcaccgattgcggattcgaacatccttcggaggtccag
caaaacgcgattccccaagctatgctcggtaccgatgtcttgtgccaggccaagtctggt
cttggtaaaacggccgttttcgttctcaccacacttcagcaagttgatcccgtcgcggga
gaaacctctgttttggtaatgtgccacacccgtgagctcgcctaccagatcaagaacgag
tatgctcgtttcagcaagtatatgccggacgtaaagactggcgtgttttacggcggaacc
ccaatcctcaaagatgccgaaattctcaagaacaaagagacacacccacatatcatcgtc
gctacacctggaagactaaacgcattggtgcgtgacaaatacttgcgactcggtagctgc
aaagttttcgtcctcgatgagtgcgacaagatgctggaacagatcgatatgcgccgtgac
gttcaagagattttcagagctactccaacacagaagcaagtcatgatgttcagtgcaacg
ctttctcaagaagtccgcccaatttgcaagaaatttatgcaaaatcccatggaaatctat
gttgatgacgacacgaagcttactctccacggtctcgcacagtactacatcaaacttgac
gagaaggagaagaatcgaaaacttaatgagctgcttgacgagctgcatttcaatcaagtg
atcattttcgtcaagagcactcttagagccacagaattggacaagcttttgagggaatgt
aatttcccttccatcgcagttcactcaggcgttggtcaagaggagcgcatcaagcgctat
aaggaattcaaggaattcaacaagcgtatctgtgtcgcgactgatgtgtttggccgtggt
attgatattgaacgtatcaacgtggccatcaactacgatctaccaggtgacgccgattca
taccttcaccgtgtcggacgtgctggtcgtttcggaaccaagggtatctccatttctttt
gtcagcaacgaagctgatcaggaagtgctgaaggagatcgagaaaagatttgaggcttct
gttcctgaatacccagagggggggattgactccaatacctacatggccaactaa
DBGET
integrated database retrieval system
