Glarea lozoyensis: GLAREA_01538
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Entry
GLAREA_01538 CDS
T04883
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
glz
Glarea lozoyensis
Pathway
glz03022
Basal transcription factors
glz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GLAREA_01538
09124 Replication and repair
03420 Nucleotide excision repair
GLAREA_01538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glz03021
]
GLAREA_01538
03400 DNA repair and recombination proteins [BR:
glz03400
]
GLAREA_01538
Transcription machinery [BR:
glz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GLAREA_01538
DNA repair and recombination proteins [BR:
glz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GLAREA_01538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
19460596
NCBI-ProteinID:
XP_008086945
UniProt:
S3D0R5
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MDRVDGTDHYEGDVQGPGPSLLVIVLDTNPHAWTLLHPTLPLSKAIANILVFINAHLASH
NANQVAVVASHCHRAVWLYPRPQAANSVDVEMKDASHPSLNDANKYRPFALIEDSLLTSL
RELVATTTEPDISTTNTSQMAGALTLALAYINKVNVAYLDENTSPSKESTTSVDTTTNVT
GLQSRILVISVSGDLAHQYIPIMNTTFAAQRLRIPIDILKLAGDTVFLQQASDTTKGIYM
QLSNPQGLLQYLMMAFLPDNTSRKSLVAPTQEVVDFRAACFCHRRVVDVGFVCSICLSIF
CTPPEGAVCMTCSTHLTLGDYGAKPAVVPRRKKKKRKLNGGVDTPSPQGTPVPGK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtagatggaacggatcattacgaaggcgatgtacaaggccctggtccatcc
ctcctcgtcattgtactcgataccaatcctcacgcatggacactattacatccgactctc
cccctctcgaaagcgatcgccaacattcttgtatttataaacgcacatcttgcctctcat
aatgccaatcaggtagctgtagtcgcgagccattgccatcgtgcggtatggctctatcct
cgcccccaagctgccaactcggtagacgtcgagatgaaagacgcctctcacccaagtctt
aatgacgccaacaaataccgcccatttgctcttatagaagatagtcttctcacttccctc
cgcgagttggtagcgaccacaacagagccagacatatctactacgaatacctctcagatg
gctggtgctcttaccttagctttggcatatataaacaaagtcaacgtagcttacttggat
gaaaacaccagcccctccaaggaatccactacctcggtcgacaccacaacgaacgtgacc
gggttacagagtcgtattttggtgatttcggtgtctggggatttggcgcatcaatatatc
ccaataatgaacacaacattcgcagcccagcggttgcggataccaatagatatattgaaa
ctagctggagatacagtattcttacaacaggcatctgatactaccaaagggatttacatg
cagttaagtaacccacaggggctgctacagtatctcatgatggcatttctgccggacaac
acatctcggaaaagtctagtagcgcccacgcaagaggtggtagattttagagcagcatgt
ttctgccatagaagggtggtggatgtcggctttgtgtgcagtatatgcctgagcattttc
tgcacgcctccagaaggtgctgtgtgtatgacatgctcgacacacctgacactcggtgac
tatggtgcgaaaccagcagttgttcctcggaggaagaagaagaagcggaagcttaatgga
ggagttgataccccaagcccccaaggaactcctgttcctggaaaatga
DBGET
integrated database retrieval system