Glarea lozoyensis: GLAREA_01870
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Entry
GLAREA_01870 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
glz
Glarea lozoyensis
Pathway
glz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GLAREA_01870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_01870
Enzymes [BR:
glz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
GLAREA_01870
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
GLAREA_01870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
MMR_HSR1
nSTAND3
SRP54
AAA_24
AAA_21
TniB
ATP_bind_1
ABC_tran
AAA_15
SRPRB
AAA_35
Zeta_toxin
AAA
AAA_23
AAA_16
Motif
Other DBs
NCBI-GeneID:
19460928
NCBI-ProteinID:
XP_008087277
UniProt:
S3DHA1
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MSIPGLSSIPGLGQAPATATFAPTFVTSATVVHELQANSEWRFEVAFGTSIEVKLLSGTA
EIFGTELAEKHTYTFRGTKAAIFTWHGCRIEVSGPCEEYVAEDTPMIPYVNTHFALERLR
DEAKEKGAEGPKVLVVGPNNAGKTSLIKMLAAYAIKMGRQPMVINTDSREGMLSVPGSLT
ATPFSSIIDVEQGWGSSPTSGPSPVPVKLPLCYYYGLPSPEDNTSMFKQVLTRLALAAAS
RLTADPAVKETGMIIDTPGAMAQGKEGYDLISHIVREFSVNVIIIIGSERLYSEMNRRFA
SGTTNTLPITVVKLDKSGGCVDRDETYLRHCQEAAIKEYFFGDPRRTLSPHTQNVSFDEA
TIYRIREPNKTDTSFLPGGEADAIFSTSQIYDKSDPSPEMLHCVFAIMHATLRDSQETIR
DASVMGFVYVAGVDEKKRVIKVLAPLNTRISDRPMVWGSWPEMSGSLI
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataccaggattatctagtattcctggccttgggcaagctcccgccactgctacc
tttgcgccaacctttgtgacttcagcaactgttgtccacgagttacaagctaactcggaa
tggcgcttcgaagttgcctttgggactagcattgaggtcaagctcctctcaggaaccgct
gaaatctttggcacagaactcgccgagaagcacacatacacattccgcggaacgaaagct
gccattttcacatggcatggctgtcgaatcgaagtctcggggccgtgcgaagagtatgta
gcggaagacacacctatgattccatatgtgaacacacacttcgctttagaaaggctgaga
gacgaagccaaggaaaagggagcggagggaccaaaggttcttgttgtgggaccaaacaat
gcggggaaaacaagcttgattaagatgctagcggcttatgctatcaaaatggggagacag
cctatggttatcaacacggactcaagagaagggatgttgtcggtaccagggagtttgacg
gcaacgccattttcctccatcatcgatgtagagcagggatgggggagcagtccaacgagt
gggcccagcccagtgccagtaaagttaccattatgttactactatgggttacctagtccc
gaagataatacaagcatgttcaagcaagtcttgactcggttggcgttagcagcagcaagt
agacttacggctgacccagcagtaaaagagacaggcatgattatcgatactccaggtgcc
atggcccaaggcaaggaaggttatgatttgatttcacatatagttagagaattctcagta
aacgtaatcatcatcatcggctcagaacgtctctacagtgaaatgaaccgtcgcttcgct
tcaggaaccaccaataccctccctataaccgtagtaaaactagacaaatcaggcggttgc
gtcgacagagatgagacttacctccgccattgtcaagaagcagcgatcaaagaatacttc
tttggcgaccccagaagaactttaagtccacacacccaaaatgtatctttcgacgaagca
accatctaccgcatccgcgaaccaaacaaaaccgacacctccttcctccccggcggcgaa
gcagacgccatcttcagcacctcccagatctacgataaatccgacccttcgccagaaatg
ctgcattgcgtctttgccattatgcacgccacgctacgagactcccaggagacgattcga
gacgccagcgtgatgggtttcgtgtatgtggcaggcgtggacgagaagaaacgcgtgatt
aaggttttggcgccgcttaatacgaggatttcggatcggccgatggtgtgggggagttgg
ccggagatgagtgggagtttgatttag
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