Glarea lozoyensis: GLAREA_01872
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Entry
GLAREA_01872 CDS
T04883
Name
(RefSeq) WD40 repeat-like protein
KO
K10610
DNA damage-binding protein 1
Organism
glz
Glarea lozoyensis
Pathway
glz03420
Nucleotide excision repair
glz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GLAREA_01872
09124 Replication and repair
03420 Nucleotide excision repair
GLAREA_01872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
glz04121
]
GLAREA_01872
03400 DNA repair and recombination proteins [BR:
glz03400
]
GLAREA_01872
Ubiquitin system [BR:
glz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
GLAREA_01872
DNA repair and recombination proteins [BR:
glz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
GLAREA_01872
TCR (transcription coupled repair) factors
Cul4-CSA complex
GLAREA_01872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
19460930
NCBI-ProteinID:
XP_008087279
UniProt:
S3CJI7
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MAYLAPIHRPSSVRHAIKLNLLDPEKECLVVAKANRVEIWEPTTEGLVMRYSKAIHGSVS
MFAKLRPSNAITDHLLIGTIRFRYFTVAWNPETQQLDTMQSFEDLTEKYIEESNTQDRCL
VDPTGNFFMMELYQGILSLGKIKLKFRKGWGNDDYLEKPEQVRITELKVRASAFLYTDSK
QPKIALLYEEAKGKMRLSTYRIVDEKMQFSAFDPARDRENDIGDLDMDANMLIPVSKGQS
EERRHVSRNASQNRAQLGGVIVVGETMILYLDDESKASLAVGLTEAAAFVAWERYDDLNF
LLADDYGKLHLLTIIAEGSLVVDIKVRKLPGTTSRATKLVYMGEGVLFVASHSGDSQVIA
LNLEEGSQSITVLQTMPNVAPVLDFAVMDMGNREGEVQSNEFYSGQARLVTCSGAFEDGS
LRSVRSGVGLEDVGVLADMEDIRDVFSLRSSPTAEVDDILVVSFPTEARVFTFDIEGQIE
EVEEFRGLSLDQPLLLVMNLPNGSLLQVTPSSVTILGQGPSFVTSQWTPPAEQVITAASA
NSGHVLLSSDGTTLVSLDIENGLQCVASQPLSNSEQVACISVSSEIPNVGVVGFWKSGSL
SILRLTDLQIIQSEDLRRMNNASIPRDICLTQILPRDQYGPTLFVAMEDGIVLTFNVDSS
DCKLSGRKAIVLGTQQARLQTIPREDGLFNVFATCEHPSLIYGSEGSVVYSAVTAEDAVC
VCSFNGEAYPGCIVVATPETLKISLIDTERRTHVQTLPIGKTVRRIAYSTNEAAFAIGCI
HRELVDGEERITSSLELVEEVLLGNIGKPFVFDGDLGPELVECVVRAELPIAHGDGTTAE
RFIVGTSYLDSEVATTSDQPNARGRILVFAVDTSKNLFMVHSRVLRGACRRVAVFDDGKI
VAALVKTVVVMKYLETTAVSAELTSLATYRTSTCPIDIDISGNIIAVADMMKSVSLIEYV
PGKEGLDDQLTEIARHHEAFWSTAVLHLEENRYLETDMDGNIIILARNPEGVTLEDRKRL
VVTSEINLGEMVNKIQKINVEPSPNALVVPKAFLATTEGSIYLFSLIPPSHITLLTNLQT
NIAAHIQTLGDIDHASYRAFKNQERETAEPFRFVDGELVMRFLDVGELVQEEICQGLGVG
SEEVRGVVEELRRLC
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcttgctccgatccatcggcctagcagtgtacggcatgccataaaattaaat
ctgctggatccagagaaggaatgtcttgttgttgcaaaggcgaatcgagttgaaatatgg
gagcctacgacagaggggctggtgatgcgctattcgaaagcaattcatggctccgtttcg
atgtttgcaaagttgcgcccctccaatgccattacggatcaccttttaataggcacgata
cggtttcgatattttacagtggcgtggaacccagaaactcagcagctcgataccatgcag
tcatttgaggaccttacagagaagtatatcgaagagtccaatacgcaggatcgatgtctc
gtagatccgacggggaacttcttcatgatggaactgtaccagggaatcttgagcttgggg
aaaatcaaactcaaatttaggaagggatggggaaacgatgactatttagaaaaaccggaa
caggtacggatcacagagttgaaggttcgagcgtcagcctttttatataccgattccaaa
caaccgaagatagcgttgctttatgaggaggcgaagggaaagatgcgattgtccacgtat
aggatcgtcgatgagaagatgcaattttcagcttttgatccagccagggaccgggaaaac
gatattggcgacctcgatatggatgcgaatatgctaattcccgtatcaaaagggcagagt
gaagagcgacggcatgtctccaggaatgcaagtcaaaatagagcacaattgggaggagtt
attgtggtaggggagacaatgatattatacttggatgatgagagtaaagcttcgctggca
gtgggtttgacagaagctgctgcgtttgtcgcgtgggaacgatatgatgacttgaatttt
ctgctggcagatgactatggcaagcttcatctactgacaataattgcggagggctcgcta
gtagttgatattaaggttcgaaaacttccgggtacgacaagcagagccacgaaattggtg
tacatgggagaaggagtccttttcgttgcctcacatagtggcgactcgcaggtcattgct
cttaatttagaggaaggcagccagtcgatcactgttctacaaaccatgccgaacgttgct
ccagtactagactttgctgttatggatatgggaaatcgcgaaggagaggttcaatcaaat
gaattttactccggtcaagcacggctagtcacttgcagcggagcttttgaagatggcagt
ctacgaagtgtacgtagcggagtgggtttggaggatgtcggagttcttgcagacatggaa
gatatacgagatgttttctcactacgctccagtccgacagccgaagttgatgatatcctg
gttgtttctttcccgacagaagctcgagtcttcacatttgatattgaggggcaaatcgag
gaagtggaagagttcagaggtctgtccttggatcaaccacttctgctagtgatgaacctc
ccgaatgggtcgcttttacaagtcaccccctcatcagtcacaatccttggacaagggccc
tcgtttgtcacatctcaatggacacctccggctgagcaagtgataacggccgcttcagca
aactctggtcatgttttactgtcctcagatggcaccacattagtgtccttggacatagag
aacggccttcaatgtgtagcgtcacagccattgagtaattcagaacaagttgcttgcatc
agtgtctcctctgagattcctaatgttggcgttgtaggattctggaaatcaggctctcta
tctatattgagactgacagacttgcaaattattcagtccgaggacttgcggcggatgaac
aatgcctccattccgcgggatatatgtttgacccaaatactgccgagagatcaatacgga
cctacattattcgtcgctatggaagacggtatcgtcctgacgttcaatgtcgacagtagt
gattgcaaactttccggaagaaaagcaattgtacttggaacccagcaggcacgacttcag
acgattccacgagaagacggtctatttaatgtttttgcgacatgcgaacaccctagttta
atatatggctcagaaggaagcgtggtttactcggcggtaacagctgaggatgctgtctgc
gtgtgttcatttaacggagaagcatatcctggatgcattgttgttgctacacctgagact
ctgaagatctctttaatagacacagaaagacggactcacgtccaaacactaccaattgga
aagacagtaagaaggattgcgtattctacgaacgaagcagcgttcgcgattggatgtata
caccgagagttagtggatggagaagaaaggattactagtagtttggaactggtcgaggag
gttctccttggtaacattggcaagccttttgtcttcgatggagacctcggaccagagctt
gtcgaatgcgtagttcgtgcggaactaccaattgctcatggagacggcacaaccgcagag
agatttatcgtaggtacaagctatttggacagcgaggtggctacgaccagtgatcagccc
aacgccaggggaaggatattggttttcgcagtggacaccagcaagaatctgttcatggtt
catagtcgtgtattaagaggcgcttgtaggagagtagccgtatttgatgatggaaagatc
gtggcagcccttgtcaaaaccgtagtggttatgaaatacctcgaaaccaccgccgtgtcg
gcagagctcacaagcttagcaacctaccgcacttcaacatgtcctattgacatagacata
agcggcaacattattgctgttgcagatatgatgaaatctgtttcgctgatcgaatacgtt
ccaggaaaagaaggattagacgatcaactgaccgaaatcgcccgtcaccatgaagctttc
tggtcgacagctgtgttgcacctagaagagaacaggtacttagaaacagacatggatggc
aatatcatcatccttgctcgaaatccagaaggagtaacactcgaggaccgcaagagactc
gttgtaacaagtgagataaatcttggagaaatggtcaacaaaatccagaaaatcaacgta
gaaccttcaccaaacgcattggtcgtccccaaggcgtttttggcaaccactgaaggttcc
atctacctgttctcactcatcccaccttcacacatcacgctcctcaccaacttacaaacc
aacatcgcagctcatatccagacgctcggagatatcgatcatgcttcttaccgcgcgttc
aagaatcaggaaagagagactgctgagcccttcaggttcgtggatggggagctcgtgatg
aggttcctggatgtgggagagctggttcaggaggagatttgtcagggattgggggtgggt
agtgaggaggttcggggggtggtggaggagttgaggaggttgtgttag
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