Glarea lozoyensis: GLAREA_01957
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Entry
GLAREA_01957 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
glz
Glarea lozoyensis
Pathway
glz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLAREA_01957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_01957
03036 Chromosome and associated proteins [BR:
glz03036
]
GLAREA_01957
Enzymes [BR:
glz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLAREA_01957
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
GLAREA_01957
mRNA degradation factors
5'-3' decay
Decapping complex
GLAREA_01957
Chromosome and associated proteins [BR:
glz03036
]
Eukaryotic type
Gene silencing
piRNA pathway
GLAREA_01957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
QSregVF
NA-iREase2
AAA_19
CMS1
Motif
Other DBs
NCBI-GeneID:
19461015
NCBI-ProteinID:
XP_008087364
UniProt:
S3CJR8
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MADALTNQLESTTLAGEAGPDDWKKALKVPAKDTRHQTEDVTATKGLDFEEFKLKRDLLM
GIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALERINPKSSKVQCLI
LVPTRELALQTSQVCKTLGKHLGINVMVTTGGTTLRDDIVRLADPVHIIVGTPGRILDLA
GKNVADLSECPMFIMDEADKLLSPEFTPVIEQLLQFHPNDRQVMLFSATFPITVKTFSDK
NMQSPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELL
AKKITELGYSCFYSHARMIQANRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFD
FPKNAETYLHRIGRSGRFGHLGLAINLINWEDRFNLYNIERDLGTEIQPIPQTIDKNLYV
YDSPENIPRPISNFQTNTRQPSGREQPREPQQQSGNQRPNTQGGYSNGRQNGSNQNQGQR
QPQGQRQGPGQNFSRGNGRFDHNNRRGGGAPGGTQSRQNQNQTPNGYEGQGRGGGRGQPP
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgctctgacaaatcaactagaatctacaaccttagctggtgaggctgggcca
gatgattggaagaaggcactaaaggttcctgccaaggacacaagacatcagacggaagat
gttaccgccaccaaagggctggattttgaggaattcaaactcaagcgggatctgttgatg
gggatttttgaggctggattcgagaagccatcaccgatccaagaagaggctatccctgtc
gcccttactggacgagacattctcgctcgtgcaaagaatggcactggcaaaactgccgcg
ttcgttattccagcgctcgaacgcatcaatcctaaaagctcgaaggtccaatgtttgatt
cttgttccaacccgagaattggctctgcaaacatctcaagtgtgcaagacactgggaaag
cacctcggcattaatgttatggttaccacgggtggtacaactttgcgcgatgatatcgta
cgcttagcagatccggttcatatcatcgttggcacaccaggcagaattttggatttggct
ggaaagaatgtggccgacctcagcgaatgtcctatgttcatcatggacgaagctgataaa
ctcctctcacctgaattcacccctgtaattgaacaacttttgcaattccacccgaacgac
agacaagtcatgctatttagcgcgaccttccctatcaccgtcaaaaccttttcagacaag
aatatgcagagtccttacgaaattaaccttatggacgaactgacgcttcgcggtatcacg
caatactatgcttttgtggaggaaaagcagaaggtccactgtctaaacacattgttttcc
aagctccagattaatcaatcgatcatcttttgcaactccacaaatcgggttgagttgctc
gcaaagaagattaccgaattaggatactcatgtttttacagtcacgctcgaatgattcaa
gcgaatcgtaacagagtgttccacgatttccgcaatggtgtttgccgaaatcttgtttgt
tctgatctgctcacccgaggtattgatatacaagctgtcaatgttgtcatcaattttgat
tttccaaagaacgctgaaacgtatcttcatcgtattggtcgatctggtcgtttcgggcat
cttggtcttgcgatcaacctgattaactgggaggaccgcttcaatctttataatattgag
cgagacttaggaaccgaaatccaaccaattccgcagaccatcgacaaaaacctctacgtc
tacgacagcccagagaacattccacgaccgatttcaaacttccagacaaatacccgtcag
cctagcggaagagaacaacctcgggaacctcaacagcagtctggcaaccaaagaccgaac
actcaaggtggctatagcaacggtcgacagaacggctcaaatcagaaccaaggccagaga
caaccacagggacagcgtcaaggcccaggacaaaatttctctcgtgggaatggcaggttc
gatcacaataaccgccgtggaggaggggccccaggcggtactcagagccgacagaatcag
aatcagaccccaaatggctacgaaggtcaaggacgaggagggggccgcggccaaccccct
caataa
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