Glarea lozoyensis: GLAREA_02993
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Entry
GLAREA_02993 CDS
T04883
Name
(RefSeq) RNA-binding, RBD
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
glz
Glarea lozoyensis
Pathway
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_02993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
glz03041
]
GLAREA_02993
Spliceosome [BR:
glz03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
GLAREA_02993
Complex B
GLAREA_02993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
DUF3752
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
19462049
NCBI-ProteinID:
XP_008086269
UniProt:
S3CPK5
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MTDKLPPNLLALFAPRPALRWVAPSDHAPAERKTPNISGIAAFLPQLQEYKETDDYKPTE
SWLQRKDRLKMEKKQHQEKLLKEGPTGYKPSEDPNIRGDAFKTLIVARLSYEATEQDLES
EFGRYGAIERIRIVVDTHQDEKPNKKKKKHRGYAFVVFEREKDMRAALENCDGIRIKDRR
IKVDVERGRTVRDWKPRRFGGGKGGRGYTKTIPPRPMGPGSFNGPPGGPGGFRGGGFRGG
FDGGRGRGGFRGGFQDRGGYGGGGGGRGGIGYSGGGGFSGGRGGFGGDRGSNGYGAPPNA
PAGPGGRVGGPPANDRGAGGFSRGGYGGSGSPERNGNSAPAGGYDSRGGGRSYDDRNGGY
RGGGGRSYNDRDSIRGSGSNMEPVRPREGGRDGGGYRDRDRDGGYGGRPREDDSRKRQYE
SNGYEEDPRKLRRY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaaacttccaccaaatctccttgccctctttgcgcctcgccctgctctacga
tgggtagccccgtccgaccacgcgcctgcagaacgcaagactcccaatatcagcggcatt
gcggccttcctaccacaacttcaggaatacaaggaaacggatgattacaaacctaccgaa
tcatggctccaaagaaaggatcggttgaagatggaaaagaagcaacatcaggagaagctt
ttaaaggagggcccaacaggctacaaaccctcagaagatccaaatattcgaggggatgct
ttcaagaccctcattgtcgcacgactcagctatgaggcaaccgagcaagacctggaaagt
gaatttggccgctatggcgctattgaaagaatccggattgttgttgacactcaccaagac
gaaaagccgaacaagaagaaaaagaagcatcgtggatatgcatttgtggtctttgagcga
gaaaaagacatgagagctgctctagaaaactgtgatggtatccgaatcaaagaccgtcgc
atcaaagtcgacgttgagcgtggccgaaccgtgagagattggaaaccacgtcgtttcggc
ggcggaaaaggtgggcgaggatacaccaaaacgattccaccaaggcctatgggacccgga
tctttcaatggacctccaggaggacccggcggcttcaggggcggtggatttcgaggtggg
tttgacggcggcagaggaaggggcggtttccgaggcggtttccaagaccgtggggggtac
ggtggtggcggaggtgggagaggtggtattggctattcgggaggcggaggcttctctggt
ggcagaggagggttcggtggtgaccgaggttctaatggatatggtgcccctcccaatgcg
cccgctggccctggtggtagagttggcggaccccccgctaacgacagaggagctggtggc
ttcagcagaggaggatacggcggctctggatcccctgagcgaaacggaaactcagcgcca
gctggtgggtatgattcgcgtggtggtggccgctcatatgatgatagaaacggtggctat
cgcggcggcggcggcagaagctacaatgaccgtgactcgattcgtggaagtggcagcaac
atggagccggtaaggccaagagagggaggtagagatggtggtggctatcgggacagagac
cgagacggtggctatggtggccgaccacgagaagacgactcacgcaagaggcagtacgaa
agcaacggctacgaagaggaccctcggaaacttcgaagatattag
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