Glarea lozoyensis: GLAREA_03079
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Entry
GLAREA_03079 CDS
T04883
Name
(RefSeq) RNA-binding, RBD
KO
K13091
RNA-binding protein 23/39
Organism
glz
Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
glz03041
]
GLAREA_03079
Spliceosome [BR:
glz03041
]
Common components
Common spliceosomal components
General mRNP proteins
GLAREA_03079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
19462135
NCBI-ProteinID:
XP_008086355
UniProt:
S3CN64
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MSALDVEALLDSTANATPTEPNGSSRKDGDDRHKSERNDRRDRERNRDVSRDRDRDRKRR
DRSRDKSRREINGDKEVMGTPTSEHGSAHGSAKSRRRSRSRDDDRRHSRRHRDSPDDTSR
RDGDFWRAGGRARTRSRSPNRYYRPRGERRDRDDAESKSRDDRRGGRNESRRVSRSPKRE
ATPPLTEDERDRRTVFVQQLAARLRTRDLIGFFEKVGPVKEAQIVKDRVSGRSKGVGYVE
FKNEESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNPEAAGSNPNSIPFHRLYVGNIH
FSITESDLQNVFEPFGELEFVQLQKEEQGRSRGYGFVQFRDPNQAREALEKMNGFDLAGR
PIRVGLGNDKFTPESTASLLQRFQGQSHQQQFQGSAFSGAGGRGPQAANGSNFDRAGGRD
NDKSAGGASALDDTDVGGVNFNNYSRDALMRKLARTDEPTTSSNGREERREILKPKTESK
PLPPGVNMASRCVVLKHMFDPTGQDNDDWIKELEDEVRAEAEAKYGHVVHIAIDPNSDGD
IYLKFDRVQGGENAIKGLNGRFFDGRTINATPVVDAVYSSLFSRTKAI
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcactcgatgttgaggcgttgttggattcaactgcaaatgccaccccaactgag
ccaaacggatcgtccagaaaggatggtgatgaccgccacaaatcagaacgcaacgaccgc
agagaccgagagcgtaatcgtgatgtcagtcgtgaccgcgatcgggaccggaaaagacgc
gaccgaagtcgggacaaatctcgcagagagatcaatggtgacaaggaggtgatgggcaca
ccgaccagtgagcacggtagcgcccacggcagtgcaaagagtaggcgtagaagcagaagt
agagatgatgaccgtcgacactcacgacgccacagagacagcccagacgacaccagccgt
agggatggcgacttttggcgagcaggtggtcgcgctcgcacacggtctcgcagcccgaac
agatattaccgtcctcgcggagagcgtcgtgatcgcgacgatgcggaatcaaagtctaga
gacgatcgtagaggcggtcgcaatgaaagccgtcgagtcagcagaagcccgaagagggag
gctacacctccattgacagaggacgagcgtgatcgtcgcacagtttttgttcaacaacta
gctgcacgtcttaggactagagatctcataggtttctttgaaaaggttggtccagtcaag
gaggctcagatcgtgaaagaccgagtaagcggcagatcaaaaggtgttggttatgttgag
ttcaagaacgaagaatcagtccctgctgctatacaactcactggacagaagctcctagga
attcccatcatcgcccagcttaccgaagccgagaagaaccgacaagttcgtaaccctgaa
gctgctggtagcaatccgaattcaatccccttccatcgactatatgtgggtaatattcac
ttcagcataactgaaagcgatctacagaacgtctttgagccttttggagaactcgagttt
gtacagctacaaaaggaagaacagggacgtagtcgtggatatgggtttgtccagttccgt
gacccgaaccaagctcgggaagctttggaaaagatgaatggatttgatctggctgggcgg
ccaattcgtgttggacttggaaacgataagtttactcctgagtctaccgccagtctcttg
cagagattccaagggcagagccaccaacaacaatttcagggttccgcattctctggcgct
ggtggacgcggtccccaagccgccaacggtagcaatttcgatcgtgccggcgggcgcgat
aacgacaaaagcgctggtggagccagtgcattggacgatacagatgttggaggtgttaat
ttcaacaactatagtcgagatgcgttaatgagaaagctcgcgcgaactgacgaaccgacg
actagcagtaatggccgagaggagagacgcgagatactgaaaccgaagacagaatccaaa
cctcttccacccggcgtcaatatggccagtagatgtgtcgtgctcaagcatatgtttgac
cccactgggcaagataatgacgactggataaaagaattggaggatgaagttcgagcagag
gctgaagcgaagtatggccacgtggtacacatcgcgatagatccgaactccgatggcgac
atttatctcaagtttgatcgcgtccaaggaggagaaaatgccatcaagggccttaacggc
aggtttttcgatgggcggaccatcaacgctacgcctgttgtggatgcggtctacagcagt
ttgttctctcgcacaaaggctatctga
DBGET
integrated database retrieval system