Glarea lozoyensis: GLAREA_03187
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Entry
GLAREA_03187 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
glz
Glarea lozoyensis
Pathway
glz03013
Nucleocytoplasmic transport
glz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GLAREA_03187
03015 mRNA surveillance pathway
GLAREA_03187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_03187
Enzymes [BR:
glz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLAREA_03187
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
GLAREA_03187
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2999
Motif
Other DBs
NCBI-GeneID:
19462242
NCBI-ProteinID:
XP_008086462
UniProt:
S3CLC6
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MSDPAKSASLADRVTRPGLDASSSSFTPGAASTQSTSWADEVASPVAPKEDPLVSTVGDA
QVDGQVEPLGGSGGSFIDDVQYDVEVTLTLEELQRQEGNPLHSVKSFEELGLSPQVLQGL
FAMNFKKPSKIQEKSLPLLLRSPPQNMIAQSQSGTGKTAAFVITILSRLDYSVNKPQALC
LAPSRELARQIEGVVKSIGQFVEGLTIQGAVPGAVPRGERLESKVVVGTPGTVMDLIKRR
QFDTSQMKILCLDEADNMLDQQGLGEQCLRVKQMIPSLSQILLFSATFPDDVLRYAEQFC
PNAIQIKLQRNDMNVAGIKQMYMDCPSDDGKYDILARLYGLMTIGSSIIFVKKRETADSI
AARLLSDGHNVVAVHGAFEGGERDAILEKFRLGEAKVLITTNVLARGIDVQSVSMVINYD
IPMKGRSDSEADSETYLHRIGRTGRFGRVGVSISFVFDRKSYVALQSISQHYGIELIRLD
TDDWDQTEKVVKSVIKSSRAGTNFKK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcccgcgaagtctgcgtctcttgcagaccgagtgactagacctggacttgac
gcaagttctagctcgttcacgcctggcgccgcgtccacccaatcgacttcatgggctgat
gaagtagcatctcctgttgcacccaaagaagatccccttgtatctaccgtaggcgacgcg
caagtagatggccaggttgagccactaggcggctcaggcggttctttcattgatgacgtt
caatacgatgttgaggttacgttgacactggaggaactacagcgccaggaagggaatcct
cttcactcggtcaagtcctttgaggagcttggattatctccccaagtactacaggggctt
ttcgctatgaactttaagaagccatccaagatccaagaaaaatcactcccgctcctattg
cgatctcctccacaaaatatgattgcgcaatcacaatccggtactggaaaaacggccgct
ttcgttatcaccatcctttctcgactcgattattctgtcaacaagcctcaagctttgtgt
ctcgcgcctagtcgtgagcttgctcgacaaattgagggcgtagtcaagagcataggtcag
tttgtcgagggcctgacgatacaaggtgctgttcccggagcggtaccccgcggtgaacga
ctggaatcaaaggtggtggttggaacgcctgggacagtgatggatctcatcaaacgccga
caattcgacacatcgcaaatgaagattttgtgcttggatgaggctgataacatgctggat
cagcaaggtcttggcgaacaatgtttacgggtgaagcaaatgattccatctctcagccaa
attttgctcttttccgccaccttccccgatgacgtccttcgttacgccgagcagttctgt
ccgaatgctattcagatcaaattgcaacgtaatgatatgaacgtagctggtatcaagcaa
atgtacatggactgcccctcagacgatggaaagtacgacatccttgctaggctttatggt
cttatgactatcggctcatccatcattttcgttaagaaacgagagactgccgatagtatt
gctgcgcgattgttatccgatggccacaatgtcgtcgccgtccatggtgctttcgaaggt
ggagagcgcgatgctattctcgaaaagtttcgcttgggcgaggccaaagtcctgatcacc
acaaacgttctcgcacgtggtatcgatgtgcagtcagtgtccatggttattaactacgat
atcccaatgaagggtcgaagcgacagtgaagccgattccgaaacttacttgcaccgaatc
ggtcgaaccggtagatttggacgtgttggtgttagtatcagtttcgtattcgaccgaaaa
agttacgtggctcttcagtctatttcacagcactacggcatcgagttgatcagactggat
accgatgactgggatcaaactgagaaagtggttaagagcgtaatcaaatccagtcgggcg
ggcaccaacttcaaaaagtaa
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