Glarea lozoyensis: GLAREA_03233
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Entry
GLAREA_03233 CDS
T04883
Name
(RefSeq) Sm-like ribonucleoprotein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
glz
Glarea lozoyensis
Pathway
glz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLAREA_03233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_03233
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GLAREA_03233
mRNA degradation factors
5'-3' decay
Lsm complex
GLAREA_03233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
19462288
NCBI-ProteinID:
XP_008086508
UniProt:
S3DL95
LinkDB
All DBs
Position
Unknown
AA seq
164 aa
AA seq
DB search
MEHLTLNDEVAAMGGGPQQQQQLPPQMFTTAAQLLDLTDKKLMVALRDGRKLIGVLRSWD
QFANLVLQSTIERIFIPPTPSTPGYYADFPRGIFLVRGENVLLLGEIDLDKDDDVPEGYE
RGEPGMVQRLDKERKGREARRERVVKKRLAEEGFEGEGLGEALL
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atggagcatctcacgcttaatgatgaggttgcggcgatgggaggcggaccgcagcagcag
cagcagttgccgccgcagatgttcacgactgctgcgcagttgttggatttgactgataaa
aaacttatggttgcgctccgcgacggcaggaaattaatcggtgtgcttcgaagctgggat
caattcgcaaacctcgtcctccaatccaccatcgaacgcatattcatccctcccaccccc
tccaccccaggttactacgccgacttcccccgcggcatcttcctcgtgcgcggcgagaac
gtgttgttgctcggcgagattgacctcgataaagatgacgatgtgcccgaggggtatgag
aggggtgagcctgggatggtgcagaggttggataaggaacggaaggggagggaggccagg
agggaacgcgttgttaagaagagactggcggaggaggggtttgagggggaggggttgggt
gaggcgcttttgtga
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