Glarea lozoyensis: GLAREA_03238
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Entry
GLAREA_03238 CDS
T04883
Name
(RefSeq) Ribosomal protein S5 2-like protein
KO
K12589
exosome complex component RRP42
Organism
glz
Glarea lozoyensis
Pathway
glz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLAREA_03238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_03238
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GLAREA_03238
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
GLAREA_03238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
19462293
NCBI-ProteinID:
XP_008086513
UniProt:
S3DL98
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MAPSALQQILLSPAELSYLHTSLSYTPPIRPDGRTSTQFRPLIAECDILPGTNGSARICF
ADGTEAIVGIKAEVEKSRPTFREDEDEGKKGRNEWVEISVEIPGFRDDDSMPVFLGAMLS
EALLADGSFVERLWINRRFHWKIYLDILLLSQPLSYPLPLLSLTTHLALLSTRLPALKSE
QDEDPLFNDDWDAAVYLFPRESDIARPPITLLVMAVGSNIIFDPSKEELAVAESVLAVSV
AERPTDDESRSLKLLAVRTIDPPSRLTQPGVANEVNTATGGTAVGSVGERVLKREIKGEK
GVWQPPRGGAKRVLVREMIRRVLEPGGVADEVLEGLEGVELG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctccctcagccctccaacaaatcctcctctcccccgccgaactatcctacctccac
acctccctctcatacacccctccaatccgtcccgacggccgcacctcaacccaattccgc
cccttaatagcagaatgtgacatcctcccgggaacaaacggtagcgcgcgcatatgtttc
gcagacggcaccgaagcaatcgtaggaatcaaagcagaggtcgagaaatcgcgtcctaca
ttccgggaagacgaagatgaggggaagaaaggcaggaatgagtgggtggaaataagtgta
gagattccggggtttagagatgatgattcgatgcctgtgtttttgggagcgatgttgagt
gaggcgttgcttgcggatgggagttttgtcgagaggctgtggattaatcggaggtttcac
tggaagatttatttagatattctactcctttcacagccactatcatacccattaccactc
ctctcactaaccacccacctcgccctcctctccacccgtctccccgccctaaaatcagaa
caagacgaagaccccctcttcaacgacgactgggacgcggccgtctacctcttcccgcgc
gaatcagacatcgcccgtccacctatcactctcctcgtcatggccgtgggatccaacatt
attttcgacccttccaaagaagaactcgcagtcgcggaatccgtcctcgctgtgtcagta
gctgaacgtccgaccgacgatgaaagcaggagtttgaagttgttggctgtaagaacgatt
gacccgccgagtcgacttacgcagcctggcgtcgcgaacgaggttaatactgcgacgggc
gggacggcagtggggagtgtgggggagcgcgtgttgaaaagggagatcaaaggggagaag
ggggtttggcagccgccgaggggaggggcgaagagggtacttgttagggagatgattaga
cgggtgctggagccgggaggcgtggctgatgaggtgttggaggggttggagggtgtggag
ctgggctga
DBGET
integrated database retrieval system
