Glarea lozoyensis: GLAREA_03648
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Entry
GLAREA_03648 CDS
T04883
Name
(RefSeq) DNA polymerase III clamp loader subunit, C-terminal
KO
K10754
replication factor C subunit 1
Organism
glz
Glarea lozoyensis
Pathway
glz03030
DNA replication
glz03410
Base excision repair
glz03420
Nucleotide excision repair
glz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GLAREA_03648
03410 Base excision repair
GLAREA_03648
03420 Nucleotide excision repair
GLAREA_03648
03430 Mismatch repair
GLAREA_03648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
glz03032
]
GLAREA_03648
03400 DNA repair and recombination proteins [BR:
glz03400
]
GLAREA_03648
DNA replication proteins [BR:
glz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GLAREA_03648
DNA repair and recombination proteins [BR:
glz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GLAREA_03648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_33
AAA_22
nSTAND3
AAA_16
RNA_helicase
AAA_14
AAA_24
RuvB_N
AAA_5
AAA_18
AAA_28
AAA_17
Motif
Other DBs
NCBI-GeneID:
19462703
NCBI-ProteinID:
XP_008082092
UniProt:
S3DFC3
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MPADIRNFFGNKTSTPIREKEVKKEEDPKKKRAKSRKIIDDSDEEEPVPKKATPKKAPPK
KPTKKEEPKAEETTTEDYFASTSKSKPKSTKSTPRKPNPPPNTETSSRSSTRKAKAVVYN
NNLADEELAFLDDDEDAGDDIFAAGVKKAGKEKDAYVESESDDEPVVAKQNKPSANRKAS
RTDGDVSGKTATAERHASPDVIMIDQPTGSVTSRKRKSVELDSEEDEEEIKPKIKSVKSQ
STKPPPAKKARAPAKKPLETEKSAVQAILDNIPTVRAPTPPAKDPNHKYDWKKGGQGGGG
GNAGPPPAAGSKEMPVGAENCLAGMSFVFTGLLETLSRDDGQALVKRYGGKVTTAPSGKT
SFVVLGSDAGPSKLRKIHELKIKTIDEDGLFSIIRELPANGGDGQAAEKHMEKKTAEMEK
IKREAEEMEKEERKKALEAEKDRKTAEKLAAATGSRAPPPRAPPPSSLLWTSKYAPTAIN
QICGNKGQVEKIQKWLKGWAQAHKYEFSKKGPDGLGGYRAIMIHGPPGIGKTTAAHLAAK
LAGYDVLENNASDTRSKKMVETGLNEVLSNNSLRGYYAGDGKPVDATKKNIVLIMDEVDG
MSAGDRGGVGAMAKICKKTDIPMILICNEFNQQKMKPFEHVTFPIPFKRPTVDMVRSRIA
TICHREGMKLPMNVIDALIEGSNKDIRQIINMISTAKLDESSMDFDDTKAMTKAWEKSVV
LKPWDICHKILGGGMFAPSSKATLNDKLELYFNDHEKSFLMVQENYLNQKPMLASSYQGR
QQHLKTLQLMDQAAESISDGDLVDRMIHGSQQQWSLMPTHGIFSMVRPASFISGAGSGTK
FTTWLGNNSKQGKLTRYVKEIQSHMRLRTSGDRHEIRQQYLPVLWTRLIDRLQREGKSAA
EEVIELMDSYFLTREDFDFIMELGLGPQDESRVKIDSQAKATFTRLYNQKSHPMPFMKAS
NVMAPAAKSKADKPDLEEALEEDDEPEAAEPEVKAEDEILEEELKKDKFIKQPKSKKPAA
KKPAKKKASKAEEDDEEDSEEEVKPKPKAKAKATSKGKSKK
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatattcgtaactttttcggaaacaagacttccactcccattcgagagaag
gaagtcaaaaaggaggaagatccaaagaaaaagcgggccaaaagtcgaaagattatcgac
gacagcgacgaggaagagccagttcctaagaaagcaacccccaagaaagcacctcctaag
aaacctaccaaaaaggaggaaccaaaagcagaagaaactactaccgaagattacttcgca
tctacctccaagtcgaagccaaagtccaccaaatccaccccacgcaaaccaaatccacca
cccaataccgaaaccagcagtagatcttctacacgaaaggcaaaggctgtagtttacaac
aataacctagccgatgaagaacttgcttttctagatgatgatgaggatgccggagatgac
attttcgcggcgggcgttaagaaagctgggaaagagaaggatgcttacgttgaaagtgag
agcgacgacgaaccggttgtggcaaaacaaaataagccttccgcgaaccgtaaagcgtca
agaactgacggtgatgtatctgggaagactgcgacagctgagcgtcatgcaagtcctgat
gtgatcatgattgaccaacccactgggtccgttacaagcaggaaacgaaaatcggtagaa
ttggactcagaggaagatgaggaggaaatcaagccaaaaatcaagtctgtgaaaagccaa
tcaaccaagccaccaccagcaaagaaagctcgtgcgccagcgaagaaacctttggaaacc
gaaaaatcagctgttcaagctatactggataatattccgactgtgcgggcaccgacgccc
ccagctaaggatcctaatcacaaatacgactggaagaaaggcggacaaggtggcggcggc
ggaaatgcaggaccacctcctgcggctggctcaaaggaaatgcccgttggagcagagaat
tgtctagcaggaatgagttttgtgtttacaggtctgctcgagacgctttcgcgggatgat
gggcaagcacttgttaagcgatatggtggtaaagtcacaacggcccctagcggaaagaca
tcttttgtcgttcttggatccgacgcgggtccttccaaattacgaaagattcatgaactt
aagattaaaacaatcgacgaggatgggctgttttctattatccgcgaactgcccgcgaac
ggaggagatggccaagcagctgagaaacacatggagaagaagacagcagagatggagaaa
atcaaaagagaagctgaagagatggaaaaggaggagcgaaaaaaggccctagaagccgag
aaagacaggaaaaccgctgagaaacttgccgctgctacgggttctagagcccctcctcca
agggcaccgccgccaagctctctcttgtggaccagcaaatatgcccctacagcaattaat
cagatctgtggaaataaaggccaagtcgagaaaatccaaaaatggctgaaaggctgggca
caagctcataagtacgagttttctaaaaagggtccagatggtctcgggggataccgagca
atcatgatccatgggccgcccggcattggtaaaacaacagccgcacacctagctgcgaag
cttgctggttacgatgtattggagaacaatgcaagtgatacgcgaagcaagaaaatggtc
gagactggcctgaacgaagtgttgtctaataactccctgcgagggtattatgctggagac
gggaaaccagtcgatgccaccaaaaagaatatcgtcctcatcatggatgaggtggatggc
atgtcagctggagatcgtggtggtgttggagcaatggctaaaatctgcaagaaaacggat
attccaatgatcttgatatgcaatgagttcaatcagcagaagatgaagcctttcgagcat
gtcacctttccgattcccttcaagcgacccactgtcgacatggtgcgttctcgcatagca
actatctgccatcgagaaggcatgaagcttcccatgaacgttatcgatgctcttatagaa
ggcagtaacaaagatattcgacagatcatcaacatgatatccacagccaaactcgacgaa
agctctatggatttcgatgacaccaaggctatgacaaaggcatgggagaaatctgtcgtc
ctgaaaccttgggatatctgtcataagattcttggcgggggtatgtttgctccctcaagt
aaagctacactaaacgacaagcttgaactttatttcaatgatcacgaaaagtcatttttg
atggtccaagagaactatttgaatcagaaaccgatgctggctagtagttatcaagggcga
caacagcacttgaagactctacagctcatggaccaggctgcagaaagcatcagtgatggc
gatctggttgatcgtatgatacatggctctcaacaacagtggagtttaatgccaactcat
ggtatcttcagtatggtcaggccagccagtttcatatctggcgctgggtctggaaccaag
tttactacctggcttggtaacaatagcaagcagggaaagcttactcgatatgtaaaggaa
atccaatctcatatgcgattgcgaacatctggagatcgccatgaaatccggcagcaatac
ttaccggttctgtggactcgacttattgatcgtcttcagagggagggaaagtctgctgca
gaggaggtgattgagttaatggacagctacttcttgacgagagaggactttgactttatc
atggagcttggacttggtccacaagacgaatcaagagtgaagatcgattcacaagcgaaa
gctacctttacccgactgtacaaccagaaatctcacccaatgccgttcatgaaagcaagc
aatgttatggcgccggcagccaagagtaaggcagacaagccagatctagaagaagcttta
gaagaagatgatgagcctgaggcggccgagcctgaagtcaaggcagaggacgaaatttta
gaagaagaattgaagaaggacaagttcatcaaacagccaaaatctaagaagcctgctgcc
aagaaacccgctaagaagaaagcatcaaaagcagaggaggacgatgaagaagattcggaa
gaagaagttaagccaaagcccaaagcgaaggcgaaggctaccagcaaaggcaagagcaaa
aagtaa
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