KEGG   Glarea lozoyensis: GLAREA_04817
Entry
GLAREA_04817      CDS       T04883                                 
Name
(RefSeq) RNA-binding, RBD
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
glz  Glarea lozoyensis
Pathway
glz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GLAREA_04817
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:glz03041]
    GLAREA_04817
Spliceosome [BR:glz03041]
 Complex A
  U2 snRNP components
   U2 related factors
    GLAREA_04817
 Complex B
    GLAREA_04817
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus
Other DBs
NCBI-GeneID: 19463872
NCBI-ProteinID: XP_008085385
UniProt: S3D7N7
LinkDB
Position
Unknown
AA seq 209 aa
MANYLASIFGTEADKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDQV
NKMNPSQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKAC
DELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPELDRELEL
STKKWLKERGRDERSMSRSPTPEPTRKRY
NT seq 630 nt   +upstreamnt  +downstreamnt
atggcgaattaccttgcctccatcttcggaacagaagccgacaaggttaattgctcattc
tactacaaaatcggagcttgccgtcacggcgatcggtgttcacgaaaacatgtcaagcca
tcctactcgcagaccatcctcctcccaaatctctaccaaaacccagcatacgaccaagta
aacaagatgaatccaagccagctgcagaatcacttcgatgcattttatgaggacttctgg
tgtgagatgtgcaaatttggggagattgaggaagtggttgtttgcgataataataatgat
catcttattggaaacgtttacgcgcgatttaagtacgaagactcagcccagaaagcttgc
gacgaactaaactcccgctggtatgccgcccggcctatttactgcgaattgtcacccgtc
accgacttccgcgaagcttgttgtagattaaacagtggcgagggatgtgtcagaggtgga
ttctgcaattttatacacaggaagaatcctagtccagagttggacagagagctggagtta
agcacgaagaagtggttgaaagagcgtggaagagatgaaagaagtatgagcagaagtcct
actccggagccgaccagaaaaaggtactaa

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