Glarea lozoyensis: GLAREA_05393
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Entry
GLAREA_05393 CDS
T04883
Name
(RefSeq) PWI
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
glz
Glarea lozoyensis
Pathway
glz03013
Nucleocytoplasmic transport
glz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GLAREA_05393
03015 mRNA surveillance pathway
GLAREA_05393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_05393
03041 Spliceosome [BR:
glz03041
]
GLAREA_05393
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
GLAREA_05393
Spliceosome [BR:
glz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
GLAREA_05393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
19464447
NCBI-ProteinID:
XP_008076873
UniProt:
S3DE72
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MATSVDAKIQKSTKFPVEFNQKVDMQKVRTEVVKKWIASRISDILGNEDDVVIEMIYNLI
EEKRFPDIKKIQIQLTGFLDKDTASFCKELWKLCLSAQSSPQGVPKELLEAKKLEIIQEK
IESEKLAEQARKRRDDEQNRERDINAIRQRERGDRGRGGPGRGGDSWRGGRGGRGDDRNR
EFDRRPGRDFDRRGPRHSRSPRRRDSRERSYRAPPLREADTYVPRGRGEPRRDMRDQRRR
PSESVSPPPKREASESRSRSPPRRRYRSQSTSRTPPRRRRSVHIGGPEVLTEGIDVEDHH
LWSAQFLAHHGLVKEEGRHQIQAVDHLHPEDVEGTQALSRDQDPYRRPDLLLDPNLGQLL
FPARPAPLDLVVGSGPERHLHQTIIQRLELVRVVNVTNVG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctccgtggacgccaaaatccaaaagtcgaccaaattccctgtagaattcaat
cagaaggttgatatgcagaaagtgagaacggaagttgttaagaaatggattgcaagcagg
atatccgatatacttggcaacgaagatgatgtggtcattgagatgatttataacctcatt
gaagagaaacgcttcccggacattaaaaagatacaaattcaactcacgggtttcctcgat
aaagacaccgccagcttctgtaaagaattatggaagctatgcttaagcgcacaaagcagt
ccacagggcgtaccgaaagaacttttagaggcaaagaagctggaaattattcaggaaaag
attgaatccgagaaactcgcagaacaagctcgaaagcgccgtgatgacgaacaaaatcgg
gagcgtgacatcaatgctattagacagagagaacgaggagaccgcggccgtggtggccca
gggcgtggaggagatagctggcgtgggggtcgaggaggacgtggagatgatagaaatagg
gaattcgatcggaggccaggaagagattttgatcgtagaggtccccgtcattcaaggtca
cctcgcaggcgcgactcaagggaacggtcttacagagcacctccattacgagaagcagat
acgtatgttccacgtggtcggggtgaaccaaggagagatatgagagaccagcgaagaagg
ccttcggaaagcgtatctcctccaccgaaacgtgaagcgtcagaatcccgctcccgatcc
cctcccagacgtcgttatagatcgcagtctacgtcgcggacgcctcctcgcagaagaaga
tctgtgcacataggggggccagaagtcctgaccgagggaatcgacgtcgaagatcaccat
ctgtggtcagctcagtttctcgctcaccacggcctggtaaaagaagaaggtcgccatcag
attcaagcagtcgatcacctccacccagaagacgtagaaggaactcaagctctgtctcga
gatcaagatccatatcgaagaccagatctgttactcgatccaaatctcggccagcttctg
tttcccgctcgcccagccccgctcgatctcgtagtagggagcgggccagagagacatcta
caccagacgataatacagagactcgagctcgtaagggtggtgaacgtgacgaacgtcggc
taa
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