Glarea lozoyensis: GLAREA_05466
Help
Entry
GLAREA_05466 CDS
T04883
Name
(RefSeq) ARM repeat-containing protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
glz
Glarea lozoyensis
Pathway
glz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GLAREA_05466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
glz03009
]
GLAREA_05466
Ribosome biogenesis [BR:
glz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GLAREA_05466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
HEAT
TOR1L1_N
CEP104-like_TOG
GNC1_N
8TM_micro
Motif
Other DBs
NCBI-GeneID:
19464520
NCBI-ProteinID:
XP_008076946
UniProt:
S3ECU9
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MASALAAQLSQIAANSTNSLNLKAQKAAHSKSLIFEPRVAASQSFDTLYTLCHEGFQELC
LLDGRFLEFQRGIFSEQSQEIDRTQMTTAENTDLNKQIEAFLGLVGGRLRLNPGIKAVEW
LVRRFRVHEHNTHFLLTTFLPYHTLPIFNTLMSILPFKIPGDFKFLQPYVRSLTSPSRHA
IVQAAITNSTFMATLNSYVIRISRSRVHYPALLAFWAGVMTESVGGLLDRARSGRKGVQQ
QNEQDVILKLIPTLNEGLAMKDVPDLRLGCYMLLSVMASKGGLDDKILTAMMEALVLGWR
ADTITSGLVCLSVLANHRAAKQLTRRLTKELMKIENLPKLLINISQQRRVDKLANGLCLS
LTDRLKKQGDLRALSIIQEIIESQILSDQQSGVVLKSLLLVAHQLDDSPEQITLRPHLAS
TLVGLAQLAGHTGDLVRGVLRDTEVDIDELEMKLQTTIRPELLQASTTDDAIMEDATTEP
AAPSFQSLFDSLPTRTAAESSFLCHDTSHVYPDLCRAFLSSTASEADLHTFDAAPILRRE
TALEDSLYLTFYMRTWSAPHPVLARASALQLTTNFLLESKMTSVDVQAVLPYAVSALSDP
AAKVRRAAADLLIAMNHLYPETIESKKELKNLPRWGSEDLYGPGPETTTTLKWLTADVVM
RLLREILIPSLEECVLDAKAIQTILQRAIQSQSHSEGSAKADSTRLPQTARASILSFFAS
HVVQTPQYSVKLRLLASLNQVRSVGSLTRTKILLPVLQQWASLSVEEASRYCREAEVNEV
DFDDECFSVITSNDEEGLQLLAQIIKGEAASDRPTLLTAAFKRLRSLWSSLKGHSRLTTA
QMLIATALSQPSKSDHHTQLAAQTASQFLGSASLTTDILLSFMDDLPTAASMTDKPPVSK
RRRTSHGEVARSSIRDPKELSDAIRKVTFVLQLIDSSSPGTHPELLGGLFGILAEIQHFK
AQATSELAYLQGLVLSSLFSILQAFRSNPKLKLDRAAIRTDLLVDCVQKTASPQVQNAAL
LIVASLADIAPELVLHSVMPIFTFMGNSVLRQNDDYSAHVISQTIREVIPPLISSLRKGK
TNIVSGAAELLLSFVAAFEHVPSHRRKGLFTSLVQTLGSEDFLFAILAMLVNKYGPTESI
KNFAVDLTSSFRVETQLLSVAKYLDLVSDILKPKPTYSVAILNTNDDGLSDPSAVAFAEM
RLLPAILSQRALVKQAGKILERDDMDSSRIRDLYSSLLESILGLADVVKEEAQLHSSCGD
ILEALLGLLSTSEFLKSAEDLLNRPNDSLRRKILRALEVRVDQESTSNAASRTAMLGFLP
QLTAIIRESKDVLYKHTAVACVDKISEKYGKKDLEAVSAAAETIASEDCLGQSDDRLRVM
ALLCLASLVDILREGVVSILPSAIPKTLEYMELSVERADGQKLHNAGYAFMSALIQHLPY
MVSGPYLDRLLKISNLSAEADLDDDADESRVQCLHLAAKQIDAKSLFVALEKNWDLAASQ
GPVALHEYVEVLQNAVNKQPKSVITKYSAILSNIFKKAFDLRRQQTVSERGFESEVVTEL
EDELNDVAIKMIHKLNDATFRPIFAGLVEWASSSLPKKDTSGRVLRLQSLYGFITLFFDN
LKSIVTGYASYLIENAVDILKNVNPKDEESKKLWTRVLQTLVKCFEHDQDDFWQAPAHFS
AVAPVLCTHLAYSSSLPVNEDLISAVVELAAAADSSDHHKELNGAILKHMRSESSSVRLA
AVQCQQAMTDRLGEEWLSMLPEMLPFISELQEDDDDIVERETNRWIVKIEGVLGESLDSM
LQ
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcattggcagctcagctgtcgcaaatagctgcaaattcaacaaattcgctg
aatttgaaagcgcaaaaggccgcgcattccaagtctttgattttcgaacctcgagtcgcc
gcatcacaaagcttcgatacattatataccttgtgccatgaaggatttcaggagctctgt
cttctggatgggcggtttttggagtttcaaagggggatcttcagtgaacaaagtcaggag
atagacaggactcaaatgacgaccgcagaaaacacagacctcaataagcaaatagaggct
ttcctgggtcttgtcggcggaaggttaaggttgaatccaggtataaaggctgtagaatgg
cttgtccggcggtttcgcgttcatgaacataatacgcatttcctcttaacgaccttcctc
ccctaccacacgcttccaatattcaacacattgatgtctatacttccattcaagatacct
ggggattttaaatttctacaaccatacgtacggtctcttacctcgccatcaaggcatgct
attgtacaagcggcaataaccaactctacatttatggcaacgctcaattcgtacgtcatt
cgaatcagcagatctcgagtacactaccctgctctattagcattctgggctggtgtcatg
acagaatcagttgggggactgttggatagagccagatcaggccggaaaggtgtccaacag
caaaacgaacaagacgtgattttgaagttgattcccacgctcaatgaaggcttggccatg
aaggacgtgccagatctacgtcttggttgttacatgctactttctgttatggcttccaag
ggtggacttgatgacaaaatcttgactgccatgatggaagctttggtattgggctggaga
gcggacacaattacttcaggcctcgtctgcttatctgttctagcaaaccatcgagccgca
aagcagctgacaagaaggctcacaaaggagctaatgaaaatcgaaaaccttccaaaattg
ttgattaatatttcacaacagcgcagggtggataagcttgcaaatggtctctgtctttct
ctaactgaccgtctcaagaagcaaggtgacctccgggcactttcaataatccaggagatt
attgagagtcagatattgagcgaccaacaatctggcgtagtccttaaatcgctacttctt
gttgcacatcaattggacgatagtcccgaacagataacactgcgaccgcatctcgcttcg
actttagtaggtttggcgcagttagctggccatactggtgatttggtgcgtggtgtctta
cgagataccgaagttgatatcgatgagttggaaatgaaacttcagacaacgattcgcccc
gagcttttgcaagcgtctaccactgacgatgccatcatggaagacgctacgaccgaacct
gcagctcccagcttccaatccctattcgacagtctacctacaagaacagcagcagaatct
tcgtttttatgtcacgatacctctcacgtctatccagatctttgccgagcctttctgtcc
tcaacagctagtgaagcagatcttcacactttcgacgccgctccaatccttcgacgcgaa
actgcactggaagactcgctgtacctcactttctacatgaggacctggtctgcccctcac
cctgttcttgctcgagcgtcagcactccagttgactacgaactttcttttggagtcgaag
atgacatccgttgatgtgcaagctgtactgccatatgcagtatctgctcttagcgatcct
gcggcaaaagtccgccgcgcagcggcagacctactgatcgccatgaaccacttataccct
gagactatagagtccaaaaaggagttgaagaatctccctcgctggggatctgaagattta
tatggtccaggccccgaaaccacaacaaccctcaaatggctcactgccgacgttgtgatg
cgtctcttgagagaaatactgattccgtcactcgaggagtgtgttttagatgcaaaagct
atccagaccatattgcagagagccattcaaagtcaaagccactccgagggctctgccaaa
gcagattccacacgactaccacagaccgcaagagcttctattttatcgttctttgcttct
catgttgtccaaacacctcaatattctgtgaaacttcgactcctcgcgtctctcaatcaa
gttcgctctgttggctcattgacaagaactaagattttactgccagtcctacaacaatgg
gcctccctcagtgtggaagaggcttctagatactgtcgtgaagcagaagtcaatgaagta
gattttgatgacgaatgtttctccgtgattacatccaacgatgaggagggattgcaactg
ttggctcaaataattaagggtgaagcagcctcagacaggcccactctgctgactgcagca
ttcaaaaggctgcgatcgctgtggtcttcattaaagggtcattcgaggttgaccacggct
caaatgctgattgcaacagcactttcccaacctagtaaatctgatcaccacacccagctt
gccgctcaaacggcttctcaattccttggaagcgcctccttgacaactgacatactcctt
tcttttatggatgaccttcctactgcagcttcaatgactgacaagcctccggtttcgaaa
agacgaaggacaagccacggcgaagttgcgcgaagttctatcagagaccctaaagaactt
tctgatgccattaggaaggtcacctttgtcttacagcttatcgattcttcaagtccagga
acacaccctgaactactcggtggactatttggaatcctcgctgaaatacaacacttcaag
gctcaagccacttctgagcttgcctatcttcaaggtctagtcctgagtagcctcttttcg
attttacaagcctttagatccaaccctaaactaaagctggatcgtgcagcaattagaaca
gatttacttgtcgattgtgttcaaaagacggcgagtccacaggtgcaaaatgccgccttg
ttgatcgtagcctcccttgcagatattgcgcctgagcttgttcttcacagcgtcatgccg
atttttaccttcatgggcaactcagtcttgagacagaatgatgactactccgcacacgtt
atcagtcaaactatacgtgaagtcattcctccactaatatcttcgctccggaagggcaag
acaaatattgtttctggagcagcagaacttctcttgagttttgtcgcagcgtttgagcat
gttcctagccatcgcagaaagggactttttacatctctggtccagaccctaggatctgaa
gattttttgttcgccatactagccatgctcgtcaacaaatacgggccaacagagagcatc
aaaaactttgccgttgatttgaccagctcattcagggtggaaacacaactactgtccgtc
gcaaagtatctcgatcttgtcagtgacatattgaagccgaaacccacctactcggttgct
attttgaacacaaatgacgacgggttatcggatccttctgcggtcgcgtttgctgaaatg
cgactgttacccgcgatactctcccaacgtgccttggtcaagcaagcaggaaagatactc
gaacgagacgacatggactcttctaggatccgagacctgtactcttctctcctcgagagt
atactggggctggcagatgttgtaaaggaagaagcgcagctacacagctcctgtggagac
attttggaggcacttctaggccttctttcgaccagcgagttcctcaaatccgctgaggat
ttactaaacagaccgaacgattctctacggcgcaagatacttcgagctttggaagtccgc
gtcgatcaggaaagcacctcaaatgctgcctcccgcacagcaatgcttggtttcctaccc
caacttaccgctatcatccgtgagtccaaggatgtattgtacaagcatacagctgtcgct
tgcgtcgacaagatctccgaaaagtatggaaagaaagatcttgaggccgtctcggcagct
gcagaaacgatagccagtgaagattgtttgggccagtcagatgatcgactgcgggtaatg
gcgctgttgtgcttggcctcactagttgacatactgagggaaggtgttgtatctatcctt
ccttccgcaattcctaaaactttggagtacatggagttgagtgtcgaacgcgcagatggg
caaaagctccacaatgctggatatgcttttatgagcgcactgattcaacacttaccatat
atggtatctggtccctacttggacagactccttaagatatcgaatctttccgccgaggca
gatctcgatgacgatgccgacgaaagtagagtacagtgtcttcacctagcagcaaagcaa
attgacgcgaagagtctttttgtggcgttggagaaaaattgggatctagctgcgtctcaa
ggtcctgtagcactccacgagtatgtcgaagtcttacaaaacgctgtcaataaacaaccc
aagagtgtcatcacaaagtattctgctattttgtcaaatatattcaaaaaagccttcgac
ctacgtagacaacaaactgttagcgagcgtggattcgaatcagaagtcgtcacagagctg
gaagatgagctcaatgatgtggcgattaagatgattcataagctgaatgatgccactttc
cgacccattttcgccggtctcgtcgagtgggcgtcttcttcactgccaaagaaagacact
tcaggcagggtcttacgcctgcaaagcctgtacgggttcatcactcttttcttcgacaat
ctgaaatccatcgtgactggatacgcaagctatttgatcgagaacgccgttgatattctc
aaaaacgtcaacccaaaggatgaagaatccaagaaattatggacgagagttctccagact
ttagtcaagtgcttcgaacacgaccaagacgacttctggcaagcacctgctcatttcagt
gctgtggcgcctgtcttatgtacccatctcgcgtacagctcgtctctacctgtgaacgaa
gacttgatttctgccgttgtggagcttgctgcagctgcagactcttcagaccaccacaaa
gagctcaatggggcaatcttgaagcacatgcgatcagaatcctccagcgtccgtctagca
gccgtgcaatgtcaacaagccatgactgaccggcttggcgaagagtggctatcaatgtta
ccagagatgttgccgttcattagtgaattacaagaggacgacgatgatattgtcgaaaga
gaaacgaaccgctggattgtgaagatcgaaggtgttctgggtgaaagcctggactctatg
ctccagtga
DBGET
integrated database retrieval system
