KEGG   Glarea lozoyensis: GLAREA_05675
Entry
GLAREA_05675      CDS       T04883                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
glz  Glarea lozoyensis
Pathway
glz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GLAREA_05675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:glz03041]
    GLAREA_05675
Spliceosome [BR:glz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    GLAREA_05675
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML PRP4 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 19464729
NCBI-ProteinID: XP_008077155
UniProt: S3DD77
LinkDB
Position
Unknown
AA seq 507 aa
MHPSRQAYVEEAEPEDRGIDLQNIPLDHDYEMPSATAGIAPERASAILNQFNRKRKAAAI
AVPTDDGRVRARLREMGEPITLFGEGLGDRRDRLRQLMAIQAEIDEAEDDDGDARMGGVE
EDENGEQEEEFYTKGLPELVEARRDIARYSLPRAKRRIATQKVESTIPLRTHVKFRKEIK
ERLQGFELQGSQMAGERPVSMVRFSPNGEMIAAGNWGGGIKLLTVPNLEESRTLRGHTDR
IGGITWHPEATLEGTNVSTSSLNLASGGAEGNVHLWSLDQDTPLATLSGHNQRVCRTEFH
PSGKYLASASEDTTWRLWDVTTTTELLLQEGHSRGVFALSFNTDGSLLASAGMDSIGRIW
DLRTGRTVMILEGHIRPIYALDWGVDGHRVLSGSGDGWIKCWDVRKVQPSGGVGAHKSVV
SDLRWYKGDGELPSAGKPKKAGTFFVSSGFDKNINVFSADDWGLVQSLSGHTGNVHAVDV
ERRGRWIVSGGYDRTVKLWGRNDMEEL
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgcatccttcacggcaggcctatgtagaggaggcagagcctgaggataggggtattgat
ctccagaatatccctctcgatcatgactatgagatgccatcagccacggctggtattgcc
cctgaaagagcctccgcaatcctcaaccaattcaaccgcaaacgaaaagctgctgcgata
gcagtaccgacagacgatggacgagtacgcgccaggttacgggagatgggcgagcccata
acgctcttcggcgagggtctaggggaccggagagatcgtttgcgccagctaatggcgatt
caggcggagattgatgaggctgaagatgatgatggggatgcgcggatgggaggggttgag
gaggatgaaaatggagaacaggaggaggagttttatacgaaagggttaccggagttggtt
gaggcgcggagagatatagcacgatattcattaccgagggcgaaacggcggattgcgacg
cagaaggttgaatcgactataccattacggacgcatgtcaagtttcgaaaggagatcaag
gagaggttacagggctttgagttacagggaagtcagatggcgggggaacgaccggttagt
atggtgaggttttcgccgaatggagagatgattgctgctgggaattgggggggtgggatt
aagttattgacggtaccgaatttggaggagagccggacgttgagaggtcatacagacagg
ataggagggataacgtggcatcctgaggcgacacttgagggaacgaacgtctcgacatca
tcgttaaatcttgcttctggtggagcggaaggcaatgttcatttatggtcactagaccaa
gacacacctctcgctacattatccggccataaccagcgagtgtgccggacagaattccat
ccatcaggcaaatacctcgcctcggcctcagaagacacaacatggcgactctgggacgta
accacaacaaccgaactcctcctccaagaaggccactcccgaggtgtcttcgccctatca
ttcaacaccgacggctccctcttagcttccgcaggaatggacagcataggccgcatctgg
gacctccgcaccggccgcacagtcatgatcctcgaaggccacatccgccccatctacgcc
ctcgactggggcgtcgacggccaccgcgtgctctcgggctcgggcgacggctggatcaaa
tgctgggacgtccgcaaagtgcagccgtctggcggggtcggcgcgcacaaaagcgtcgtc
tctgacttacgctggtataaaggcgatggcgagctgcctagtgctgggaaaccgaagaaa
gccgggacgttcttcgtttcgagtggctttgataagaatattaatgttttttcggcggat
gattgggggttggtgcagagtctgagtggtcatacggggaatgtgcatgcggttgatgtg
gagaggagggggaggtggattgttagtggcgggtatgatcgtactgttaagttgtggggg
aggaatgatatggaggagttgtag

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