Glarea lozoyensis: GLAREA_05675
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Entry
GLAREA_05675 CDS
T04883
Name
(RefSeq) WD40 repeat-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
glz
Glarea lozoyensis
Pathway
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_05675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
glz03041
]
GLAREA_05675
Spliceosome [BR:
glz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
GLAREA_05675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
PRP4
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
19464729
NCBI-ProteinID:
XP_008077155
UniProt:
S3DD77
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MHPSRQAYVEEAEPEDRGIDLQNIPLDHDYEMPSATAGIAPERASAILNQFNRKRKAAAI
AVPTDDGRVRARLREMGEPITLFGEGLGDRRDRLRQLMAIQAEIDEAEDDDGDARMGGVE
EDENGEQEEEFYTKGLPELVEARRDIARYSLPRAKRRIATQKVESTIPLRTHVKFRKEIK
ERLQGFELQGSQMAGERPVSMVRFSPNGEMIAAGNWGGGIKLLTVPNLEESRTLRGHTDR
IGGITWHPEATLEGTNVSTSSLNLASGGAEGNVHLWSLDQDTPLATLSGHNQRVCRTEFH
PSGKYLASASEDTTWRLWDVTTTTELLLQEGHSRGVFALSFNTDGSLLASAGMDSIGRIW
DLRTGRTVMILEGHIRPIYALDWGVDGHRVLSGSGDGWIKCWDVRKVQPSGGVGAHKSVV
SDLRWYKGDGELPSAGKPKKAGTFFVSSGFDKNINVFSADDWGLVQSLSGHTGNVHAVDV
ERRGRWIVSGGYDRTVKLWGRNDMEEL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcatccttcacggcaggcctatgtagaggaggcagagcctgaggataggggtattgat
ctccagaatatccctctcgatcatgactatgagatgccatcagccacggctggtattgcc
cctgaaagagcctccgcaatcctcaaccaattcaaccgcaaacgaaaagctgctgcgata
gcagtaccgacagacgatggacgagtacgcgccaggttacgggagatgggcgagcccata
acgctcttcggcgagggtctaggggaccggagagatcgtttgcgccagctaatggcgatt
caggcggagattgatgaggctgaagatgatgatggggatgcgcggatgggaggggttgag
gaggatgaaaatggagaacaggaggaggagttttatacgaaagggttaccggagttggtt
gaggcgcggagagatatagcacgatattcattaccgagggcgaaacggcggattgcgacg
cagaaggttgaatcgactataccattacggacgcatgtcaagtttcgaaaggagatcaag
gagaggttacagggctttgagttacagggaagtcagatggcgggggaacgaccggttagt
atggtgaggttttcgccgaatggagagatgattgctgctgggaattgggggggtgggatt
aagttattgacggtaccgaatttggaggagagccggacgttgagaggtcatacagacagg
ataggagggataacgtggcatcctgaggcgacacttgagggaacgaacgtctcgacatca
tcgttaaatcttgcttctggtggagcggaaggcaatgttcatttatggtcactagaccaa
gacacacctctcgctacattatccggccataaccagcgagtgtgccggacagaattccat
ccatcaggcaaatacctcgcctcggcctcagaagacacaacatggcgactctgggacgta
accacaacaaccgaactcctcctccaagaaggccactcccgaggtgtcttcgccctatca
ttcaacaccgacggctccctcttagcttccgcaggaatggacagcataggccgcatctgg
gacctccgcaccggccgcacagtcatgatcctcgaaggccacatccgccccatctacgcc
ctcgactggggcgtcgacggccaccgcgtgctctcgggctcgggcgacggctggatcaaa
tgctgggacgtccgcaaagtgcagccgtctggcggggtcggcgcgcacaaaagcgtcgtc
tctgacttacgctggtataaaggcgatggcgagctgcctagtgctgggaaaccgaagaaa
gccgggacgttcttcgtttcgagtggctttgataagaatattaatgttttttcggcggat
gattgggggttggtgcagagtctgagtggtcatacggggaatgtgcatgcggttgatgtg
gagaggagggggaggtggattgttagtggcgggtatgatcgtactgttaagttgtggggg
aggaatgatatggaggagttgtag
DBGET
integrated database retrieval system