Glarea lozoyensis: GLAREA_05919
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Entry
GLAREA_05919 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
glz
Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_05919
03041 Spliceosome [BR:
glz03041
]
GLAREA_05919
03036 Chromosome and associated proteins [BR:
glz03036
]
GLAREA_05919
Enzymes [BR:
glz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLAREA_05919
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
GLAREA_05919
mRNA cycle factors
Common to processing body (P body) and stress granule
GLAREA_05919
Spliceosome [BR:
glz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
GLAREA_05919
Chromosome and associated proteins [BR:
glz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
GLAREA_05919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
19464973
NCBI-ProteinID:
XP_008079524
UniProt:
S3D334
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MADQLNMNGLSLGGNSYRPPHMRGKMGQDSMAGPGPGPAPGATGINGSAWANNNNGYAGG
APPQNWGPNAQAQTFTPQGGPPARGGWNDQGKSSFNPHAYGSPSGNGSGGGGGAPRGGGD
GRWVDGKHVAGPANQRMERELFGVPDDPTKQQTGINFEKYDDIPVEASGHDVPEPVLTFT
NPPLDDHLIKNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILSQAF
QTGPVAAPAAGGGNFGRQRKAYPTSLILAPTRELVSQIYDESRKFAYRSWVRPCVVYGGA
DIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMGFEPQIRRI
VEGEDMPGVQLRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVED
GDKRSVLLDILHTHGAGLTLIFVETKRMADLLCDFLIGQNFPATSIHGDRNQRERERALE
MFRNGRCPILVATAVAARGMY
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaactcaacatgaacggcctcagtcttgggggcaactcatacagacctcca
catatgcgaggaaagatgggacaagatagtatggcaggcccaggtccaggaccagctccc
ggagccactggaatcaacggaagcgcatgggcgaacaacaacaacggctatgctggtggt
gcccctccacaaaactggggtcctaacgcccaagcccaaacattcactcctcaaggaggt
cctccagcacgaggcggatggaacgaccagggaaagtcttcgttcaaccctcacgcgtat
ggaagcccaagtggcaacggcagtggtggcggcggtggagctcctcgtggaggtggtgat
ggcagatgggttgacggcaagcatgttgctggaccagccaaccaacgtatggaacgcgag
ctttttggtgtcccagatgacccaaccaaacagcagaccggtatcaacttcgagaagtac
gatgatatcccagtcgaggcatccggacatgatgtaccagagccagtccttaccttcacc
aaccctcctctcgacgaccatctgatcaagaacatcgagcttgctcattacaaggtccca
accccagttcaaaagtactcgattcctatcgttatgggtggtcgtgatttgatggcttgt
gctcagactggttcaggaaagactggtggtttcttgttcccaatcttgtcccaagctttc
caaaccggtcctgttgctgcaccagctgcgggtggtggtaactttggtcgtcaacgcaag
gcctacccaacctcattgatccttgctcctactcgtgagcttgtttctcaaatttacgat
gagtcccgcaaattcgcttatcgatcttgggtccgcccatgtgtcgtttatggtggtgca
gatattggttctcagctacgacaaatcgagcgtggatgtgatcttttggttgctacccca
ggtcgtctcgtcgatctcatcgagcgtggccgcatttctctccagaacatcaagtacttg
gttcttgatgaggctgatcgtatgttggatatgggtttcgagccacaaatccgaagaatc
gtagaaggggaagatatgccgggcgttcaactccgtcaaacactcatgttttcagccacc
ttcccccgggatatccaaatgctcgccagagatttcttgaaggactacatcttcctgtct
gttggccgtgttggttccacctcagagaacatcacccagaaggttgagtacgtcgaggat
ggagataagcgatctgttcttctcgatattctccacactcacggtgctggtttgaccttg
atcttcgtcgagaccaagcgtatggccgatttgctctgcgatttcctcatcggacaaaat
ttcccagctacctctatccacggtgaccgcaaccaaagagagcgtgagcgtgctttggag
atgttcagaaatggtcgttgcccaattctcgttgctactgctgtggctgctcgtggtatg
tactga
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