Glarea lozoyensis: GLAREA_06225
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Entry
GLAREA_06225 CDS
T04883
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
glz
Glarea lozoyensis
Pathway
glz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLAREA_06225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_06225
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GLAREA_06225
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
GLAREA_06225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
19465279
NCBI-ProteinID:
XP_008079830
UniProt:
S3E452
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
MAQTISVAVPGQLLGAASEYLPGPGTHIHDSKLFASILGPIKTTSPPKPAGPQKRLTKIT
PAAPAVLPTVSIERDISVGSGLDGSGKSKAEILPEVNSTVLCRVTRIQPRQASVAILVVG
ETVLDGEWQGLIRVQDVRATEKDKVKIFESFRPGDIVRAVVISLGDQSNYYLSTASNNLG
VIMATSEAGNSMYPVSWKEYRDPETGASESRKVAKPF
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaacaatttctgtcgctgttccgggccaattgctgggtgctgcaagcgaatat
ctaccaggccctggcacgcatatccacgactcgaagctctttgcctcaatcctaggacct
attaagacgacctctcctcctaaaccagctggaccgcaaaagaggttgacgaagataact
ccagcggcgccggcggtattacctacggtttcaatcgaaagagacatatccgtgggaagt
ggacttgatggatctgggaagtcaaaggcggagatcttgcctgaggtcaatagtacggtt
ctttgccgagtgacgaggattcagcctagacaggcgtctgtagcaatattggttgttgga
gagactgttctggatggagaatggcagggtctgatacgtgtgcaagacgtaagggcgacg
gagaaggataaagtcaagattttcgagagcttcagaccaggagatatcgtgcgcgctgtg
gtgatatctttgggtgatcaatcgaactactacctgtcaacggcgagtaacaatctgggg
gtcatcatggcgacaagtgaagctggcaattcgatgtatccggttagttggaaagagtat
cgggatccagaaacgggagctagcgaaagtcggaaagttgcaaagccattttga
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integrated database retrieval system