Glarea lozoyensis: GLAREA_06387
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Entry
GLAREA_06387 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
glz
Glarea lozoyensis
Pathway
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_06387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
glz03041
]
GLAREA_06387
Enzymes [BR:
glz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GLAREA_06387
Spliceosome [BR:
glz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
GLAREA_06387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
nSTAND3
T2SSE
Cas3-like_C_2
ABC_tran
SRP54
Motif
Other DBs
NCBI-GeneID:
19465440
NCBI-ProteinID:
XP_008079991
UniProt:
S3D8C0
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MGAAKKYALLPMEDDEVGPAKVVEKKERRRHRDKHSSSRHDKRSERSRERSPRRESEHRS
KTIRKREATDANFEDRWGDEEYVSEEEEPEFVESASKRIKTSHTDEEEDISDTERERRKD
QEEKDAFAKRLHSKDKDRTKKLVEDRSSTKEGNILAQRRALAEDAAARSAALPDLRERSR
QEYLKKREAERLALLRKQVAEETEELRSGARLSEKEKAEFAKNREVLRIAEERLRIDDHL
DGYAMPDDYITEKGKIDRKKKEEAMYKRYVDKDEYGQEKFVTEHEEWEREQASKAKAQIQ
SNERLDQGEYDYVLDEEQGIKWVMDSTQAGVGKGISKEEAFLAEQLKAAEKKALSMEETR
KSLPIYAYREQFLAALAEYQVLVIVGETGSGKTTQLPQYLHEAGYTKGGLKVGCTQPRRV
AAMSVAARVADEMGVKVGNEVGYSIRFEDSTSDKTVLKYMTDGMLLREFMTEPDLGGYSA
LMIDEAHERTVHTDILLALVKDLARERPEMKLLISSATMDAKGFATYFDDAPIFNIPGRR
YPVDIHYTPQPEANYLAAAITTVFQIHTSQGKGDILVFLTGQDEIEAAEQNITEISRKLG
SRVPELVICPIYANLPSELQSKIFEPTPNGARKVVLATNIAETSLTIDGIVYVIDPGFVK
ENNYNPATGMSKLVAVPCSRASANQRSGRAGRVGPGKCFRLYTKWAFMNEMEDNTTPEIQ
RTNLNGVVLLLKSLGINDLLEFEFMNPPPTETLIGALNQLFALQALNHQGELTKLGRQMA
EFPTDPMLAKAILAADKLGCVEEVLSIVSMLSESAALFFRPKDKKIHADSARARFTVKEG
GDHLTLLNIWNQWVDSDFSFVWAKENFLQQRSLTRARDVRDQLAKLCERVEVTLSTVGQA
DLVPIQKAITAGFFPNAARLQRGGDSYRTVKNNTTVYIHPSSVVMDNNPPVKMVIYYELV
QTTKEYMRSCLPIKPEWLHEAAPHFHKKKDLEALEDRKMPKARM
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgcgaaaaagtatgccctcctacccatggaagatgacgaggttgggccagcc
aaagtagtcgagaagaaggaacggcgtcggcatagggacaagcattcttcgtcgaggcac
gataaacgcagcgagcgcagccgggaacgctcaccccgcagggaatcggagcatcgatca
aagacgattcgaaaacgagaagcgactgacgcaaacttcgaagatcgatggggcgacgag
gaatatgtttccgaggaggaagagccagaatttgtagagtcggcctctaagcgcatcaaa
acgagccacacggatgaagaggaagatatctcggacacggaaagggagcgaaggaaagat
caagaggagaaagatgccttcgcgaagagactgcactcaaaagataaagacaggacgaag
aaactcgtggaggataggtcgtcgaccaaggaggggaacatcttggcccagcgacgggcc
cttgccgaagatgctgctgcgagaagtgctgcgcttcccgatctgcgagagaggtcacgg
caggaatacttgaagaagcgggaagcagaacggctggcgctattaagaaagcaggttgcg
gaggagaccgaggagctgcgcagtggtgcaaggttatccgagaaggagaaggcagaattt
gctaaaaacagggaggttttgcgaattgccgaagaacgattgcgaatcgacgaccaccta
gatggatatgctatgccagatgattatattacggagaaagggaagattgataggaaaaag
aaggaagaggcaatgtacaaaagatatgtcgacaaggacgaatacggccaagagaagttc
gtaacagaacatgaggagtgggagagggagcaggcatctaaagccaaggcgcagatccag
agcaacgaaaggctagaccaaggagaatacgactatgtgctggacgaagagcaggggatc
aaatgggttatggactcgacacaagctggtgtgggcaagggtatcagcaaagaagaggcc
ttcctagcagaacagctgaaagcggcagagaagaaagctctttcaatggaggaaacccgc
aaaagtctcccaatctacgcctacagagaacagtttctggccgccttagctgaatatcag
gtcctagtcatcgttggggaaactggtagtggaaaaacgactcagttacctcaatatctg
cacgaggcaggctacacaaaaggcggactaaaagttggttgtacacaacctcgtagggtt
gctgcgatgtccgttgctgcgcgtgttgccgatgagatgggtgtgaaagtaggcaacgag
gttggctattcgattcggttcgaagactctaccagtgataagactgttcttaaatatatg
acagatggcatgttattaagagaattcatgacagagcccgatttaggcggctactctgct
ctgatgattgatgaggctcacgaaaggacagtccacactgatattttactggctctcgtg
aaagatcttgcccgcgagagacccgagatgaaattattgatctcttctgctaccatggat
gcgaaaggctttgcgacctactttgatgacgcaccaattttcaacattcctggccggaga
tatccggtagacattcattatacaccacaacccgaagcaaattatctagctgctgcaatc
actactgtctttcagatccacacatcacaagggaaaggtgacatcttggtgttcttgacg
ggacaagacgaaattgaagcagctgagcaaaacatcactgaaatatcgcggaaactcggt
agtcgcgtaccagagttggtcatttgtcccatttacgccaaccttccatctgaattacaa
agcaagatctttgaaccgacacctaacggagcacgaaaggtcgttctggcgaccaacatc
gccgagactagtttgacaattgatggtattgtttatgttattgatccgggttttgtaaaa
gaaaacaactacaacccagctacgggtatgtcaaagttggttgcagtaccttgctctcgg
gcttctgccaatcagagaagtggtcgcgctggtcgtgttggtccagggaaatgcttccgg
ctctataccaaatgggccttcatgaatgagatggaggacaataccacaccagaaatccag
cggaccaatctcaatggtgttgtgctgcttctgaagtcactaggaattaacgatttactg
gaattcgagtttatgaacccgcctcctaccgaaacattaatcggtgcattgaatcaattg
tttgcgctccaggctttgaatcaccagggcgaactgaccaaactaggacgacaaatggca
gagtttcctaccgatccgatgcttgctaaggcaatccttgcagcagacaaacttgggtgt
gtcgaggaggttctgtctattgtctctatgctgagcgaatcagcggcactgttcttcaga
ccaaaggataaaaagatacatgctgatagtgctcgtgcccgatttactgtgaaagaaggc
ggtgatcatctcactttgctcaacatctggaatcagtgggtggatagcgactttagcttt
gtctgggcaaaagagaactttttgcaacagcgttctctgactcgggctcgagatgttcgt
gatcagctagcgaagctttgcgagcgcgttgaggtcactctttccactgttggccaggcc
gatctcgtgccaatccaaaaagctattaccgctggcttctttccgaatgcagcaagactt
caaagaggaggggacagctatcgcactgtgaaaaacaatacgactgtctatattcatcca
tcgtctgtcgtgatggacaataatcctcctgttaagatggtcatctactacgaactggtt
cagacaaccaaggaatacatgagaagttgtctgccaataaaaccagagtggcttcatgag
gcagcaccacattttcataagaaaaaggatttggaggcgcttgaagatcggaaaatgcca
aaagccagaatgtaa
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integrated database retrieval system
